Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03932 ATGGGAAACAATAAGTTCAAATTTTCAGATATGATACCAAATGCATGGTTTTATAAGCTTAAAGATATGAGCAAATCATCAAGGAAAAGAAATGGTTCACAATCTCATCATGTTATGAAGAACAAAGTAATGACTTCACCAACAACATCTCAAAGGTCACAATATTCAAGGTATTCTTCACATCATTTCTCAAATGAACAAACAAAAGTTTGTAATAAGATATTCAACTCACCAATTCATACCAAAGATTTGAACCTTCCATTCAATGATTCACCAAGAAAGTCTTCAAAAAGAAGGTCTAGAAGAAAAACTATTTATAAGCCTTCTCAACCAATATTTGATCAAGTTCAATCACAAGAACATTATGATGATAATGATGATTTGTCTTCAATTGAAAATTCTTCTTCTGAGTCTTATCATAATCAATGTGTTTCTTCTGAATCTGAATTTTGTGATAGTTTTTCTGTTCCTGATTTACTTAATTGTAGTTGTAGAGTTAGCTCTTCAACTAATGATATAATCATAGACATGAACAATGAATCTTTTCAAGGAAATTCTAAAAATTTAGATGGTTTTGATGCATTTTCACAACATGGTTTAGCTCCAATATTGACTAAGCAAGTGAAGTTTGATGATAAGAAGATCGAATCTCGAAGTTCGACCGAATTATCGGACGAACTAAAATTCGATGATTCTTTCTCAATCGAAGTTATCAAAGAAGAAGAAAATATTAATAGAATTCAAAGAAGGAGAAAAAAAAGTCAAATAGGTAAAAAAGCTTCTCCTAGTTCTCAAGGTATTAAGCTTAGAGTGAATTCTCCAAAACTTGTTAGCAAAAAAATTCAAGCTTATGGAAGAAAAAGTGTTTCATCATCATTATCAAGTGGAAGCAAAGTTTCAAGGAATGATGGAGGGTTTGTAGATGGATTTGCAGTTGTTAAATCTTCAATTGATCCAATAAGTGATTTTAAGGAATCAATGGTAGAGATGATTATGGAGAATAATATAAGAGGATCAAAGGATTTGGAGAATTTACTTGCTTGTTATCTTTCTCTTAATTCAAGTGAATATCATGATGTTATTGTTAAAGCTTTTGAGCAAATTTGGTATGATATGGCTCAACTTAGAATGTAA 1134 0.3034 MGNNKFKFSDMIPNAWFYKLKDMSKSSRKRNGSQSHHVMKNKVMTSPTTSQRSQYSRYSSHHFSNEQTKVCNKIFNSPIHTKDLNLPFNDSPRKSSKRRSRRKTIYKPSQPIFDQVQSQEHYDDNDDLSSIENSSSESYHNQCVSSESEFCDSFSVPDLLNCSCRVSSSTNDIIIDMNNESFQGNSKNLDGFDAFSQHGLAPILTKQVKFDDKKIESRSSTELSDELKFDDSFSIEVIKEEENINRIQRRRKKSQIGKKASPSSQGIKLRVNSPKLVSKKIQAYGRKSVSSSLSSGSKVSRNDGGFVDGFAVVKSSIDPISDFKESMVEMIMENNIRGSKDLENLLACYLSLNSSEYHDVIVKAFEQIWYDMAQLRM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03932 377 NCBIfam uncharacterized plant-specific domain TIGR01568 310 372 IPR006458 -
Trre9g03932 377 ProSiteProfiles OVATE domain profile. 312 371 IPR006458 -
Trre9g03932 377 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Trre9g03932 377 MobiDBLite consensus disorder prediction 24 61 - -
Trre9g03932 377 MobiDBLite consensus disorder prediction 37 61 - -
Trre9g03932 377 Pfam Transcriptional repressor, ovate 316 372 IPR006458 -
Trre9g03932 377 MobiDBLite consensus disorder prediction 82 134 - -
Trre9g03932 377 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 103 372 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03932 Trre-Chr9 47381910 47383043 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre9g03932 Ovate 1.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03932 - - cam:101489571 417.542