Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03924 ATGGAGAATACATCAAAAGTGTTGATGCAAAGATATGAATTAGGAAGATTACTCGGCCAAGGAACATTTGGAAAAGTTTACTATGGTAGAAGTACAATAACTAACCAAAGTGTAGCTATTAAAATGATTGACAAAGATAAGGTTATCAAAAATGACCAAGCTGATAGCATAAAAAGGGAAATATCGATCATGAGACTCGTAAAACATCCGAATATCATACAGCTTTTTGAAGTCATGGCAACAAAGAGTAAGATTTACTTTGTTATTGAATATGCTAAAGGCGGCGAGCTTTTCAAGAAAGTAGCAAAAGGAAAACTCAAAGAAGATATTGCACACAAATATTTCAAGCAGTTAATTAGTGCAGTTGATTATTGTCATAGTAGAGGTGTATACCATAGAGATATAAAGCCAGAAAATATTCTATTAGATGAGAATGAGAATCTGAAAATATCAGATTTTGGTTTAAGTGCTTTGGCTGAATCGAGAAGGCAAGACGGTTTGTTACATACAACTTGTGGAACACCTGCTTATGTTGCTCCCGAAGTCATCAAACGGAAGGGTTATGATGGTTCAAAAGCTGATATTTGGTCTTGTGGAGTTGTTCTTTTTGTTTTGCTTGCTGGTTATGTACCTTTCAATGACTCAAATTTGATGGATATGTATAGGAAGATAAGTAATGCAGATTTTAAGTGTCCTAATTGGTTTCCGAGAAATGTTAGGAAACTATTGTGTAAGATGTTGGATCCAAATCCTGACACTAGGATATGTATAGATAACATTAAACAATGTTCTTGGTTTAAGTATGGACCAAATGGTAGACAGAAAAAACAAGTGGAAAACAATACTATCTCTTCTTTGGCTACAAACTCTGTAGCACCGACACATCAGATTGAAGGCGTGTCGGTATCCAACACTGACACGATACCTACACATGTGACAGATGATTCTGATCAAAGGGATGAAACTGAAAAGCAAGAGTCGGTTGTGCCTGTGAGCATAAATGCCTTTGATATTATCTCTCTTTCAACTGGTTTTAATCTTTGTGGATTCTTTGAAGACAGTTTTAAGAAAAAGGAAGCGAGGTTTACTTCGAGACAACCCGCATCGATCATTATTTCGAGGATGGAAGAGATTGCAAAGAGGCTGAAGATGAAAATAAAGAAAAGGGCTGCTGGTTTGTTGAAATTAGAAGGAGTTGATGAAGGTAGGAAAGGGATATTGTGTATTGATGCTGAGATTTTTGAGGTTACTCCATTTTTTCATTTGGTTGAAGTGAAAAAATCAAACGGAGATACATTGGAATATCAGAAAATATTGAATGATGATATTAGGCCTGCTCTTCAAGATATTGTTTGGGTTTGGCAAGGTGAATTACAAGAACAATCTCAACACTCAGAGCAGCAGTAG 1407 0.3589 MENTSKVLMQRYELGRLLGQGTFGKVYYGRSTITNQSVAIKMIDKDKVIKNDQADSIKREISIMRLVKHPNIIQLFEVMATKSKIYFVIEYAKGGELFKKVAKGKLKEDIAHKYFKQLISAVDYCHSRGVYHRDIKPENILLDENENLKISDFGLSALAESRRQDGLLHTTCGTPAYVAPEVIKRKGYDGSKADIWSCGVVLFVLLAGYVPFNDSNLMDMYRKISNADFKCPNWFPRNVRKLLCKMLDPNPDTRICIDNIKQCSWFKYGPNGRQKKQVENNTISSLATNSVAPTHQIEGVSVSNTDTIPTHVTDDSDQRDETEKQESVVPVSINAFDIISLSTGFNLCGFFEDSFKKKEARFTSRQPASIIISRMEEIAKRLKMKIKKRAAGLLKLEGVDEGRKGILCIDAEIFEVTPFFHLVEVKKSNGDTLEYQKILNDDIRPALQDIVWVWQGELQEQSQHSEQQ 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03924 468 FunFam Non-specific serine/threonine protein kinase 5 304 - -
Trre9g03924 468 FunFam Non-specific serine/threonine protein kinase 328 452 - -
Trre9g03924 468 MobiDBLite consensus disorder prediction 312 326 - -
Trre9g03924 468 Gene3D Transferase(Phosphotransferase) domain 1 2 330 - -
Trre9g03924 468 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03924 468 MobiDBLite consensus disorder prediction 298 326 - -
Trre9g03924 468 CDD CIPK_C 334 448 - -
Trre9g03924 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Trre9g03924 468 Gene3D Kinase associated domain 1, KA1 331 453 - -
Trre9g03924 468 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Trre9g03924 468 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Trre9g03924 468 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03924 468 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03924 468 Pfam NAF domain 330 388 IPR004041 GO:0007165
Trre9g03924 468 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Trre9g03924 468 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 447 - -
Trre9g03924 468 ProSiteProfiles NAF domain profile. 328 352 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03924 Trre-Chr9 47316568 47317974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03924 1 460 CBL-interacting serine-threonine protein kinases AT5G58380 65.076 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trre9g03924 Pkinase 1.1e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03924 - K07198 gmx:100779316 711.835