Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03919 ATGTTTTTGCTTTTAGGGAGTTCTTCAGCTCAACTTTCTGAAAACTTCTATGCTAAGAAATGTCCAAAGCTTTTCAATGCTGTGAACTCTATTGTTCACAACGCTGTCGCTAAAGAACCTCGCATGGGAGGATCTCTTCTTCGTCTCCATTTTCATGACTGCTTTGTCAATGGTTGTGATGGATCAGTGCTACTTGATGACACCTCCTCCAGAAAAGGAGAGAAGACTGCACCCCCAAACAACAATTCATTGAGAGGTTTTGAAGTCATTGATGCCATAAAGTCTAAGGTGGAGTCATTATGCCCCGGTGTGGTCTCATGTGCTGATATTGTAGCCATTGCTGCTCGTGATTCTGTTGCCAATCTTGGAGGGCCTCTTTGGAATGTTAAACTTGGAAGAAGGGATTCAAAGACAGCCAGCTTCAATGATGCAAGTAGTGGTGTTATTCCATCACCCTTTGCTACCCTTAGCGACCTTATCAATAGGTTTAAAGCCCAAGGACTTTCTACTAAGGACATGGTGGCCTTATCTGGAGCTCACACAATTGGAAAGGCAAGGTGTATTACTTACAAAGCTCACATTTACAATGATACCAACATTGATAGTTTATTTGCTAAGTCAAGACAAAGAAACTGTCCAAGAACAAGTGGTACAATAAAAGACAACAATGTAGCTGTTCTAGATTTCAAAACTCCAAACCATTTTGATAATGTGTACTACAAGAATCTCATCAACAAAAAGGGACTCTTTCGTTCTGATCAAGTGCTTTTTAATGGAGGATCTACTGATTCATTGGTTAAAGCTTATAGCAATAATCCAAAAGCCTTTGCAAATGATTTTGTTACTGCAATAATTAAGATGGGAAATATTAAGCCTCTTACCGGATCAAAAGGGGAGATTAGGAAGCAATGCAGGAGAGCCAATTAA 927 0.3981 MFLLLGSSSAQLSENFYAKKCPKLFNAVNSIVHNAVAKEPRMGGSLLRLHFHDCFVNGCDGSVLLDDTSSRKGEKTAPPNNNSLRGFEVIDAIKSKVESLCPGVVSCADIVAIAARDSVANLGGPLWNVKLGRRDSKTASFNDASSGVIPSPFATLSDLINRFKAQGLSTKDMVALSGAHTIGKARCITYKAHIYNDTNIDSLFAKSRQRNCPRTSGTIKDNNVAVLDFKTPNHFDNVYYKNLINKKGLFRSDQVLFNGGSTDSLVKAYSNNPKAFANDFVTAIIKMGNIKPLTGSKGEIRKQCRRAN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03919 308 PRINTS Haem peroxidase superfamily signature 172 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Haem peroxidase superfamily signature 43 57 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 Gene3D - 15 305 - -
Trre9g03919 308 ProSitePatterns Peroxidases active site signature. 43 54 IPR019794 GO:0004601
Trre9g03919 308 PANTHER PEROXIDASE 72-RELATED 5 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 SUPERFAMILY Heme-dependent peroxidases 11 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 Gene3D Peroxidase, domain 2 150 287 - -
Trre9g03919 308 FunFam Peroxidase 15 152 - -
Trre9g03919 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 172 182 IPR019793 -
Trre9g03919 308 CDD secretory_peroxidase 11 306 IPR033905 GO:0004601|GO:0042744
Trre9g03919 308 ProSiteProfiles Plant heme peroxidase family profile. 11 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 Pfam Peroxidase 29 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 FunFam Peroxidase 150 287 - -
Trre9g03919 308 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Plant peroxidase signature 85 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Plant peroxidase signature 104 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Plant peroxidase signature 123 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Plant peroxidase signature 171 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Plant peroxidase signature 45 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g03919 308 PRINTS Plant peroxidase signature 21 40 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03919 Trre-Chr9 47253110 47257402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03919 1 308 Peroxidase AT5G58400 63.430 5.75e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03919 K00430 - gmx:100812478 477.248