Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03912 ATGACACTCATACTCATCCAAATTCAGAGGTGGCTGATGCATACAAAGGTATGGAGATTTGTTGGCTTTGCTTCAGCTGTTGTTGGACTTGTTTGTTATGCACTAAGCTCTTCCTTCAACCATCTATTTGGAAACTGGACTTTGTTGAAGATAATTCTTTACACTGTTTTCAGTTTCATCATCTGCCTCATGATTTTGTATACAAATATATGGAACCACTCGAGAAGTCTTCGGTTCAAAGCTCATACAGCATTTTTGGTATTGACAATCACCTCTGTCTATTCCTTTTACTTTGATAAAGTGATGAATAGAAAACCAGATGTATATAGCTTAATTTCATGTGCTGCCTTTGCTATCATGTCACTTAGTTTGTCGCGGCAAACTCAGTGCGGATTCGAAGTGGATCTTCTTTACTTTTTTCTCGGATGTCTCATTGTGTTACTCATGAAGGTTAAATTACAGCTATTCATTCTTGGAGCAGGTTTGAGTTATTCCCTTATCATTCTTCGTTCTTTCTTTTCTTCTACACAAGATATTAGATACTCTGAACTTGAACATGAAAGTTCAGTAATTATTGAAGTCAATTCGCTACAACAACTAGCCAGTACTGGTATTGCTAGTAAAATGGAACAACTAAGGTCTTATCTTAACACTCTCCAGCAGAAAAATTTGAATCTTGTTGATATACTTTTGAAGCATGTGAATGAATATGGTGACTCTGAATTGATGTCGTTCGGCCCCAACTTCATGATCGATGAGCTGCAGCCTAAATTGATCAACTACCTTCATGAAACCGCAAAGTTGATGGTGCGCGCTGGATTTGAGGAAGAGTTTTCTAATGTATACATCAATTGTAGAAGGAAATGTTTGGAAGAGTGTCTAATAAAAAGATTATTTGGCTTTCAGAAGATTAATCTAAAAAATGAACATCAAAGGGTGAGATATGTAGATACGGTGATTAAAAGGTGGATCACAGCATCCGAAATTGCTCTTAAGATTCTATTTCCCTTTGAACAACGACTCTGTGATCATGTCTTTTCAGGTTTCACCTCCTCCGCTACTCGTTGTTTCACCGAGGTTTTCCACGGAACAACATTTCAGCTTCTGAATTTCGCTGTTGAAGTTACTCATGGAAGCCCTTCAATTTGGCGTTTATTCAAAATGCTCGCAATCTATGAGACATTGCATTATCTGATATCGAAATTCCAATTATGTCCTGATTCGTTGGTGAACGACGCAGCAGTTACAGTCCAAAACAGATTAGGCGCAGCAATCAGGGATCTTTTCATGAAACTGAATTATTTGATTTTTCGTGTCCCAGAAGCTAAGCAAGTTGCTCCGTCTGATGGTCGACATCATCCAATGATGGTCCAGATAATTAGCTACCTCACTTCTGCTTGTAGGTCACGTCGTACACTAGAACAAATTTTGCAGGAATATCCCAAGGTGAATTACGAAGCAGTACTGAAAGCATCCTTCTCTTTTATAGCACAGATGGAATTGATAATGGATAGATTAGAGAAACAATTGATGTATAAGTCTAGAGACTACAAAGACCCTGCTTTGCAGTATCTTTTCATGATGAATAATAGGACATACATAGAAGCTATAATTAAAAGCCGGGACTTGGATTTGGAAACCATTTTCGGCAATGATTGGTTCAAAAAATATCAAGCAAAAATGCAAAAAGACCTTGATCTTTATCAAAGAAACTCGTGGAACAAGGTGTTGGAGTTTTTGAAGTTGGACAACAATGACTATGAGACACCTAATGATAATGTTACAGCAGAGTTATTGAAAGAGAAGCTAAAATTGTTCAACAAGCATTTTGATGAGATGTTTAGAGTTCAGTCTGCTTGGTCTGTTTATGATAAGAAGCTGAGAGAAGAAATTATAATATCAGTGGGAAATACTTTGTTGCCTGTATATGGAATCTTCATTGGGAGGTTCCGGGATTGTCTTGGTGTTCATGCTAATAAGTATATTCAATATGGAATGTTTGAGATTCAAGATCGACTCAACAATTTGTTTCTGGGAAAAAAATAG 2046 0.3715 MTLILIQIQRWLMHTKVWRFVGFASAVVGLVCYALSSSFNHLFGNWTLLKIILYTVFSFIICLMILYTNIWNHSRSLRFKAHTAFLVLTITSVYSFYFDKVMNRKPDVYSLISCAAFAIMSLSLSRQTQCGFEVDLLYFFLGCLIVLLMKVKLQLFILGAGLSYSLIILRSFFSSTQDIRYSELEHESSVIIEVNSLQQLASTGIASKMEQLRSYLNTLQQKNLNLVDILLKHVNEYGDSELMSFGPNFMIDELQPKLINYLHETAKLMVRAGFEEEFSNVYINCRRKCLEECLIKRLFGFQKINLKNEHQRVRYVDTVIKRWITASEIALKILFPFEQRLCDHVFSGFTSSATRCFTEVFHGTTFQLLNFAVEVTHGSPSIWRLFKMLAIYETLHYLISKFQLCPDSLVNDAAVTVQNRLGAAIRDLFMKLNYLIFRVPEAKQVAPSDGRHHPMMVQIISYLTSACRSRRTLEQILQEYPKVNYEAVLKASFSFIAQMELIMDRLEKQLMYKSRDYKDPALQYLFMMNNRTYIEAIIKSRDLDLETIFGNDWFKKYQAKMQKDLDLYQRNSWNKVLEFLKLDNNDYETPNDNVTAELLKEKLKLFNKHFDEMFRVQSAWSVYDKKLREEIIISVGNTLLPVYGIFIGRFRDCLGVHANKYIQYGMFEIQDRLNNLFLGKK 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03912 681 Pfam Exo70 exocyst complex subunit 321 674 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03912 681 SUPERFAMILY Cullin repeat-like 209 677 IPR016159 -
Trre9g03912 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 194 678 IPR004140 GO:0000145|GO:0006887
Trre9g03912 681 Gene3D Exocyst complex component Exo70 170 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03912 Trre-Chr9 47184446 47186491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03912 248 679 EXO70 exocyst subunit family AT5G58430 44.898 9.22e-105 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03912 - - mtr:25490887 674.085