Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03907 ATGTTCAATGGATCGGAGTCCTTGGTTGATGTTGGAGGAGGCACAGGGGCAATGGCAAAGGCCCTTGCTAAATCATTTCCAGAAATGGAGTGTTATGTATTTGATCTCCCATATGTTGTTGATGGCTTGAAAGGAAATGATAACCTAAACTATATTGGTGGAGACATGTTCAAGAAGATTCCTCCAACTGATGCTATTTTATTGAAGTCGATACTGCATGATTGGAATGATAAGGAATGCGTAAAGATATTAAAGAATTGTAAAGATGCAATAGCAAAGAAAGGTAAAAAAGGGAAGGTGATTATCATAGACATGGTGGTGGAAAAAGAGAAGAGAAACGATGAAGCAATCGAAACACAACTCTCATGTGATATGCTCATGATGGTGTTGTTCACCGGAAAAGAGAGGAACGAGGAAGAATGGATTAAGTTGATTTCCTCGGCTGGTTTCAGTAACTACAAGATAACTGCTGTTTTAGGTATAAGGTTTGTCATTGAGATCTATCCATAA 510 0.3843 MFNGSESLVDVGGGTGAMAKALAKSFPEMECYVFDLPYVVDGLKGNDNLNYIGGDMFKKIPPTDAILLKSILHDWNDKECVKILKNCKDAIAKKGKKGKVIIIDMVVEKEKRNDEAIETQLSCDMLMMVLFTGKERNEEEWIKLISSAGFSNYKITAVLGIRFVIEIYP 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03907 169 Pfam O-methyltransferase domain 2 151 IPR001077 GO:0008171
Trre9g03907 169 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 169 IPR016461 GO:0008168
Trre9g03907 169 Gene3D Vaccinia Virus protein VP39 1 169 IPR029063 -
Trre9g03907 169 PANTHER O-METHYLTRANSFERASE 2 154 IPR016461 GO:0008168
Trre9g03907 169 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 166 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03907 Trre-Chr9 47159203 47160514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03907 2 169 Monolignol Biosynthesis Gene Families AT1G51990 41.176 1.92e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03907 - K16040 gmx:100808134 243.817