Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g03904 | ATGAGTATGGCACCATACGTGCATGGGATGGTCGATCAAGTTATGATGAATCCGTGGCATCAATTGTCTACTTGGTTAAAAAATGATGATATTACGCCATTTGAAACGACACATGGGATGTTGGTATGGGATTATGCTGCGCAAAACTCCGTAGTTAGCAACTTATTTAATGAGTCGATGGCAAATGATACTCGATTAGTTTCCGAGTTGTTGGTTGAGAAGTGTAAGGGAATGTTCAATGAATTTGAGTCATTGGTTGATGTTGGAGGAGGTACGGGGACCATGGCAAAGGCTCTTACCAAATCATTCCCAAAACTCGAGTGTACTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGCAAGGAAGTGAGAAGCTAAGATATGTTGCTGGGGATATGTTTAAGGAAATTCCGCCAGCAGATGCAATTTTGTTGAAGTGGATATTGCATGACTGGAGTGACGAGGAATGTGTAAAGATATTAAAGAATTGTAAGGTTGCAATAGAAAAGAAAGGTAAAGAAGGGAAGGTAGTTATCATAGACATGGTTTTGGACAATGAGAAGGAAAACATTAATGAATCAGTTGAAACCCAACTCTTCTTTGACATGTTGATGATGGTATTACTCAAAGGAAAAGAGAGAAACAACAAAGAATGGGTTAAATTGATTTCCTCGGCCGGTTTTAGTGACTTCAAGATAACTCCAATTTTAGGATTACGGTCTGTGATTGAGATAAATCCATGA | 744 | 0.3911 | MSMAPYVHGMVDQVMMNPWHQLSTWLKNDDITPFETTHGMLVWDYAAQNSVVSNLFNESMANDTRLVSELLVEKCKGMFNEFESLVDVGGGTGTMAKALTKSFPKLECTVFDLPHVVAGLQGSEKLRYVAGDMFKEIPPADAILLKWILHDWSDEECVKILKNCKVAIEKKGKEGKVVIIDMVLDNEKENINESVETQLFFDMLMMVLLKGKERNNKEWVKLISSAGFSDFKITPILGLRSVIEINP | 247 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g03904 | 247 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 2 | 244 | IPR029063 | - | |
Trre9g03904 | 247 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 247 | IPR016461 | GO:0008168 | |
Trre9g03904 | 247 | Pfam | O-methyltransferase domain | 19 | 229 | IPR001077 | GO:0008171 | |
Trre9g03904 | 247 | FunFam | O-methyltransferase ZRP4 | 1 | 247 | - | - | |
Trre9g03904 | 247 | Gene3D | Vaccinia Virus protein VP39 | 1 | 247 | IPR029063 | - | |
Trre9g03904 | 247 | PANTHER | O-METHYLTRANSFERASE | 5 | 230 | IPR016461 | GO:0008168 | |
Trre9g03904 | 247 | CDD | AdoMet_MTases | 85 | 184 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g03904 | Trre-Chr9 | 47119353 | 47123296 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g03904 | 2 | 247 | Monolignol Biosynthesis Gene Families | AT1G51990 | 35.341 | 1.72e-45 | 154 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g03904 | - | K16040 | gmx:100808134 | 374.015 |