Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03903 ATGACTCATTCTGGCTTCTTCTCGCAACAAAATATTAACGAGAACGAGCTAGAAATTGAGTATGTGTTAACGGATTCGTCTAGATTATTACTTAAGGACAATCCAATGAGTATGGCACCATACGTGCATGGGATGGTCGATCAAGTTATGATGAATCCGTGGCATCAATTGTCTACTTGGTTAAAAAATGATGATATTACGCCATTTGAAACGACACATGGGATGTTGGTATGGGATTATGCTGCGCAAAACTCCGTAGTTAGCAACTTATTTAATGAGTCGATGGCAAATGATACTCGATTAGTTTCCGAGTTGTTGGTTGAGAAGTGTAAGGGAATGTTCAATGAATTTGAGTCATTGGTTGATGTTGGAGGAGGTACGGGGACCATGGCAAAGGCTCTTACCAAATCATTCCCAAAACTCGAGTGTACTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGCAAGGAAGTGAGAAGCTAAGATATGTTGCTGGGGATATGTTTAAGGAAATTCCGCCAGCAGATGCAATTTTGTTGAAGTGGATATTGCATGACTGGAGTGACGAGGAATGTGTAAAGATATTAAAGAATTGTAAGGTTGCAATAGAAAAGAAAGGTAAAGAAGGGAAGGTAGTTATCATAGACATGGTTTTGGACAATGAGAAGGAAAACATTAATGAATCAGTTGAAACCCAACTCTTCTTTGACATGTTGATGATGGTATTACTCAAAGGAAAAGAGAGAAACAACAAAGAATGGGTTAAATTGATTTCCTCGGCCGGTTTTAGTGACTTCAAGATAACTCCAATTTTAGGATTACGGTCTGTGATTGAGATAAATCCATGA 849 0.3875 MTHSGFFSQQNINENELEIEYVLTDSSRLLLKDNPMSMAPYVHGMVDQVMMNPWHQLSTWLKNDDITPFETTHGMLVWDYAAQNSVVSNLFNESMANDTRLVSELLVEKCKGMFNEFESLVDVGGGTGTMAKALTKSFPKLECTVFDLPHVVAGLQGSEKLRYVAGDMFKEIPPADAILLKWILHDWSDEECVKILKNCKVAIEKKGKEGKVVIIDMVLDNEKENINESVETQLFFDMLMMVLLKGKERNNKEWVKLISSAGFSDFKITPILGLRSVIEINP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03903 282 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 282 IPR016461 GO:0008168
Trre9g03903 282 FunFam O-methyltransferase ZRP4 32 282 - -
Trre9g03903 282 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 34 279 IPR029063 -
Trre9g03903 282 Gene3D Vaccinia Virus protein VP39 31 282 IPR029063 -
Trre9g03903 282 CDD AdoMet_MTases 120 219 - -
Trre9g03903 282 Pfam O-methyltransferase domain 54 264 IPR001077 GO:0008171
Trre9g03903 282 PANTHER O-METHYLTRANSFERASE 2 265 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03903 Trre-Chr9 47119248 47123296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03903 21 282 Monolignol Biosynthesis Gene Families AT1G51990 34.962 2.49e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03903 - K16040 gmx:100808134 412.92