Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g03901 | ATGCCACTCTCAAAACTCATTTCTTCACTATCAATCCATCCTACAAAGAACCACAACATTTATCGCTTGATGCGAATCATGACTCACTCTGGCTTCTTTTCTCAACAAAATGTTACCGGGAATGAGTTAGAAATTGAGTATATGTTAACGGATGCATCTCGATTACTACTTAAGGACAATCCAATGAGTGTGAGACCATTCGTCCAAGCGATGCTCGATCCGGTTTTGACAAATCCGTGGCATCAATTGTCAACTTGGTTAAAAAATGACGATGCTACAACGTTTGAAACAACACACAAGATGCTTTTGTGGGATTTTGCTTCCCGTGACTCCAATTTTAGCAACTTATTTAATGAGTCCATGGCAAGTGATGCTCGATTAGTGATCAATTTGTTGATCGAGAACTATAGGGGAGCATTCATTGGATTAGAGTCACTGGTCGATGTTGGAGGAGGCACAGGGACCACAGCAAAGGCTCTTGCTAAATCATTCCCTCAATTGGAGTGCACGGTGTTCGATCTCCCACATGTTGTTGCTGGCTTGCAAGGTAGTGATAATCTAAAATATGTTGGTGGAGACATGTTTAAAGAAATTCCTCCGGCAGATGCTATCTTGATGAAGTGGATATTGCATAGTTGGAATGACGAGGAATGTGTGAAAATATTGAAGAAATGCAAGGAATCACTCAAAAAGAAAGGTAAAGAAGGAAAGCTAATTATCATAGAGATGGTGTTGGACATTGACCAGAAGGGAGACATTACTAAATCAACTGAAACACAACTCTTCTTTGATATGCTAATGATGGTAGTAGTCACTGGAAAAGAGAGAAATGAAAAAGAATGGAGTAATTTGATTTACTCTGCAGGTTTTAGTGGATATAAGATAACTCCAATTTTAGGCTTAAGGTCTGTGATTGAGATCTATCCCTAA | 930 | 0.3925 | MPLSKLISSLSIHPTKNHNIYRLMRIMTHSGFFSQQNVTGNELEIEYMLTDASRLLLKDNPMSVRPFVQAMLDPVLTNPWHQLSTWLKNDDATTFETTHKMLLWDFASRDSNFSNLFNESMASDARLVINLLIENYRGAFIGLESLVDVGGGTGTTAKALAKSFPQLECTVFDLPHVVAGLQGSDNLKYVGGDMFKEIPPADAILMKWILHSWNDEECVKILKKCKESLKKKGKEGKLIIIEMVLDIDQKGDITKSTETQLFFDMLMMVVVTGKERNEKEWSNLIYSAGFSGYKITPILGLRSVIEIYP | 309 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g03901 | 309 | Gene3D | Vaccinia Virus protein VP39 | 57 | 309 | IPR029063 | - | |
Trre9g03901 | 309 | FunFam | O-methyltransferase ZRP4 | 58 | 309 | - | - | |
Trre9g03901 | 309 | Gene3D | - | 1 | 56 | IPR036388 | - | |
Trre9g03901 | 309 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 61 | 307 | IPR029063 | - | |
Trre9g03901 | 309 | Pfam | O-methyltransferase domain | 80 | 291 | IPR001077 | GO:0008171 | |
Trre9g03901 | 309 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 309 | IPR016461 | GO:0008168 | |
Trre9g03901 | 309 | PIRSF | O-mtase | 1 | 309 | IPR016461 | GO:0008168 | |
Trre9g03901 | 309 | SUPERFAMILY | "Winged helix" DNA-binding domain | 1 | 61 | IPR036390 | - | |
Trre9g03901 | 309 | PANTHER | O-METHYLTRANSFERASE | 3 | 294 | IPR016461 | GO:0008168 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g03901 | Trre-Chr9 | 47114540 | 47116167 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g03901 | 47 | 309 | Monolignol Biosynthesis Gene Families | AT1G51990 | 35.955 | 1.38e-51 | 172 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g03901 | - | K16040 | gmx:100781008 | 415.616 |