Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03898 ATGAGTATGGCACCATACGTGCATGGGATGGTCGATCAAGTTATGATGAATCCGTGGCATCAATTGTCTACTTGGTTAAAAAATGATGATATTACGCCATTTGAAACGACACATGGGATGTTGGTATGGGATTATGCTGCGCAAAACTCCGTAGTTAGCAACTTATTTAATGAGTCGATGGCAAATGATACTCGATTAGTTTCCGAGTTGTTGGTTGAGAAGTGTAAGGGAATGTTCAATGAATTTGAGTCATTGGTTGATGTTGGAGGAGGTACGGGGACCATGGCAAAGGCTCTTACCAAATCATTCCCAAAACTCGAGTGTACTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGCAAGGAAGTGAGAAGCTAAGATATGTTGCTGGGGATATGTTTAAGGAAATTCCGCCAGCAGATGCAATTTTGTTGAAGTGGATATTGCATGACTGGAGTGACGAGGAATGTGTAAAGATATTAAAGAATTGTAAGGTTGCAATAGAAAAGAAAGGTAAAGAAGGGAAGGTAGTTATCATAGACATGGTTTTGGACAATGAGAAGGAAAATATTAATGAATCAGTTGAAACCCAACTCTTCTTTGACATGTTGATGATGGTATTACTCAAAGGAAAAGAGAGAAACAACAAAGAATGGGTTAAGTTGATTTCCTCGGCCGGTTTTAGTAACTTCAAGATAACTCCAATTTTAGGATTAAGGTCTGTGATTGAGATATATCCATGA 744 0.3884 MSMAPYVHGMVDQVMMNPWHQLSTWLKNDDITPFETTHGMLVWDYAAQNSVVSNLFNESMANDTRLVSELLVEKCKGMFNEFESLVDVGGGTGTMAKALTKSFPKLECTVFDLPHVVAGLQGSEKLRYVAGDMFKEIPPADAILLKWILHDWSDEECVKILKNCKVAIEKKGKEGKVVIIDMVLDNEKENINESVETQLFFDMLMMVLLKGKERNNKEWVKLISSAGFSNFKITPILGLRSVIEIYP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03898 247 Pfam O-methyltransferase domain 19 229 IPR001077 GO:0008171
Trre9g03898 247 PANTHER O-METHYLTRANSFERASE 5 230 IPR016461 GO:0008168
Trre9g03898 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 245 IPR029063 -
Trre9g03898 247 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 247 IPR016461 GO:0008168
Trre9g03898 247 CDD AdoMet_MTases 85 184 - -
Trre9g03898 247 Gene3D Vaccinia Virus protein VP39 1 247 IPR029063 -
Trre9g03898 247 FunFam O-methyltransferase ZRP4 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03898 Trre-Chr9 47098587 47101766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03898 2 247 Monolignol Biosynthesis Gene Families AT1G51990 35.743 7.41e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03898 - K16040 gmx:100808134 379.407