Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03892 ATGTCCCTTAAATGTATAGTTGATTTAGGCATACCAGATATCATACACAACTATGGAAAACCCATGCCACTCTCAAAACTCATTTCTTCACTATCCATCCACCCTTCAAAGAACCACAACATCCATCGTTTGATGCGAATCATGACTCATTCTGGCTTCTTCTCTCAACAAAATATTAACGAGAACGAGCTAGAAATTGAGTATGTGTTAACGGATTCGTCTAGATTATTACTTAAGGACAATCCAATGAGTATGGCACCATACGTGCATGGGATGGTCGATCAAGTTATGATGAATCCGTGGCATCAATTGTCTACTTGGTTAAAAAATGATGATATTACGCCATTTGAAACGACACATGGGATGTTGGTATGGGATTATGCTGCGCAAAACTCCGTAGTTAGCAACTTATTTAATGAGTCGATGGCAAATGATACTCGATTAGTTTCCGAGTTGTTGGTTGAGAAGTGTAAGGGAATGTTCAATGAATTTGAGTCATTGGTTGATGTTGGAGGAGGTACGGGGACCATGGCAAAGGCTCTTACCAAATCATTCCCAAAACTCGAGTGTACTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGCAAGGAAGTGAGAAGCTAAGATATGTTGCTGGGGATATGTTTAAGGAAATTCCGCCAGCAGATGCAATTTTGTTGAAGTGGATATTGCATGACTGGAGTGACGAGGAATGTGTAAAGATATTAAAGAATTGTAAGGTTGCAATAGAAAAGAAAGGTAAAGAAGGGAAGGTAGTTATCATAGACATGGTTTTGGACAATGAGAAGGAAAATATTAATGAATCAGTTGAAACCCAACTCTTCTTTGACATGTTGATGATGGTATTACTCAAAGGAAAAGAGAGAAACAACAAAGAATGGGTTAAGTTGATTTCCTCGGCCGGTTTTAGTAACTTCAAGATAACTCCAATTTTAGGATTAAGGTCTGGGATTGAGATATATCCATGA 990 0.3859 MSLKCIVDLGIPDIIHNYGKPMPLSKLISSLSIHPSKNHNIHRLMRIMTHSGFFSQQNINENELEIEYVLTDSSRLLLKDNPMSMAPYVHGMVDQVMMNPWHQLSTWLKNDDITPFETTHGMLVWDYAAQNSVVSNLFNESMANDTRLVSELLVEKCKGMFNEFESLVDVGGGTGTMAKALTKSFPKLECTVFDLPHVVAGLQGSEKLRYVAGDMFKEIPPADAILLKWILHDWSDEECVKILKNCKVAIEKKGKEGKVVIIDMVLDNEKENINESVETQLFFDMLMMVLLKGKERNNKEWVKLISSAGFSNFKITPILGLRSGIEIYP 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03892 329 FunFam O-methyltransferase ZRP4 79 329 - -
Trre9g03892 329 PIRSF O-mtase 1 329 IPR016461 GO:0008168
Trre9g03892 329 Pfam O-methyltransferase domain 101 311 IPR001077 GO:0008171
Trre9g03892 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 81 326 IPR029063 -
Trre9g03892 329 Gene3D Vaccinia Virus protein VP39 78 329 IPR029063 -
Trre9g03892 329 Pfam Dimerisation domain 1 48 IPR012967 GO:0046983
Trre9g03892 329 Gene3D - 1 77 IPR036388 -
Trre9g03892 329 CDD AdoMet_MTases 167 266 - -
Trre9g03892 329 PANTHER O-METHYLTRANSFERASE 1 312 IPR016461 GO:0008168
Trre9g03892 329 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 329 IPR016461 GO:0008168
Trre9g03892 329 SUPERFAMILY "Winged helix" DNA-binding domain 1 82 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03892 Trre-Chr9 47075846 47079499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03892 1 315 Monolignol Biosynthesis Gene Families AT5G54160 32.508 1.30e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03892 - K16040 gmx:100808134 494.197