Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03891 ATGGAATCCCAAAACATAGAGCATGTTGGTTCCAATTTGCTCAAAGCTCAAACCCACGTATGGAATCACATTTTCAGCTTCATAAATTCCATGTCCCTTAAATGTATAGTTGATTTAGGCATACCAGATATCATACACAACTATGGAAAACCCATGCCACTCTCAAAACTCATTTCTTCACTATCCATCCACCCTTCAAAGAACCACAACATCCATCGTTTGATGCGAATCATGACTCATTCTGGCTTCTTCTCTCAACAAAATATTAACGAGAACGAGCTAGAAATTGAGTATGTGTTAACGGATTCGTCTAGATTATTACTTAAGGACAATCCAATGAGTATGGCACCATACGTGCATGGGATGGTCGATCAAGTTATGATGAATCCGTGGCATCAATTGTCTACTTGGTTAAAAAATGATGATATTACGCCATTTGAAACGACACATGGGATGTTGGTATGGGATTATGCTGCGCAAAACTCCGTAGTTAGCAACTTATTTAATGAGTCGATGGCAAATGATACTCGATTAGTTTCCGAGTTGTTGGTTGAGAAGTGTAAGGGAATGTTCAATGAATTTGAGTCATTGGTTGATGTTGGAGGAGGTACGGGGACCATGGCAAAGGCTCTTACCAAATCATTCCCAAAACTCGAGTGTACTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGCAAGGAAGTGAGAAGCTAAGATATGTTGCTGGGGATATGTTTAAGGAAATTCCGCCAGCAGATGCAATTTTGTTGAAGTGGATATTGCATGACTGGAGTGACGAGGAATGTGTAAAGATATTAAAGAATTGTAAGGTTGCAATAGAAAAGAAAGGTAAAGAAGGGAAGGTAGTTATCATAGACATGGTTTTGGACAATGAGAAGGAAAATATTAATGAATCAGTTGAAACCCAACTCTTCTTTGACATGTTGATGATGGTATTACTCAAAGGAAAAGAGAGAAACAACAAAGAATGGGTTAAGTTGATTTCCTCGGCCGGTTTTAGTAACTTCAAGATAACTCCAATTTTAGGATTAAGGTCTGGGATTGAGATATATCCATGA 1080 0.3861 MESQNIEHVGSNLLKAQTHVWNHIFSFINSMSLKCIVDLGIPDIIHNYGKPMPLSKLISSLSIHPSKNHNIHRLMRIMTHSGFFSQQNINENELEIEYVLTDSSRLLLKDNPMSMAPYVHGMVDQVMMNPWHQLSTWLKNDDITPFETTHGMLVWDYAAQNSVVSNLFNESMANDTRLVSELLVEKCKGMFNEFESLVDVGGGTGTMAKALTKSFPKLECTVFDLPHVVAGLQGSEKLRYVAGDMFKEIPPADAILLKWILHDWSDEECVKILKNCKVAIEKKGKEGKVVIIDMVLDNEKENINESVETQLFFDMLMMVLLKGKERNNKEWVKLISSAGFSNFKITPILGLRSGIEIYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03891 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 356 IPR029063 -
Trre9g03891 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Trre9g03891 359 CDD AdoMet_MTases 197 296 - -
Trre9g03891 359 Gene3D - 3 107 IPR036388 -
Trre9g03891 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Trre9g03891 359 Pfam O-methyltransferase domain 131 341 IPR001077 GO:0008171
Trre9g03891 359 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Trre9g03891 359 PANTHER O-METHYLTRANSFERASE 14 342 IPR016461 GO:0008168
Trre9g03891 359 FunFam Coniferyl alcohol 9-O-methyltransferase 3 107 - -
Trre9g03891 359 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Trre9g03891 359 Gene3D Vaccinia Virus protein VP39 108 359 IPR029063 -
Trre9g03891 359 FunFam O-methyltransferase ZRP4 109 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03891 Trre-Chr9 47075756 47079499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03891 31 345 Monolignol Biosynthesis Gene Families AT5G54160 32.508 3.09e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03891 - K16040 gmx:100808134 534.643