Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03872 ATGGCTGAGACTAGGGTAAATGCAACCATTACCGATGTTACAAATAATGGAACAATATGGATATGTGAACGCATGTTCAGGTATCAAAGGTCAAAAGGAATTTTCTTTAATGATAATCCATTTAGTTTCACATTGCCAGTGCTCTTTCTACAAACATCCCTAGTTTCTGTCTCTACCACAATTTTACGGCACATATTTGAACCAGTTGGACAAAGCACTTTCTTTCCACAACTGCTGGCAGGGGTGGTACTAGGACCATCGGTTATTGGACAAAATGCATTCATAAAAAAATGGCTATTCCCACCAAAAACATTCTACATAAGTGAGACAATTGCATTTTTTGGGAGCATGATGTACATGTTCTTAATTGGAGTAAAACTTGATGTAAGTGGTGTTACAAAAACTGGGAAAAAAGCTTGGGCAATTGGAATATTTTCATTTCTTATACCACTAATGATGACCTTGATGATTGCACTTATTTTAAGAAAAATATTTTTAACCCCCGACAAAGGTCTCTACGAGTCCATATTTTCCATTGTATTTATCTTTTCAACAGGTTCATTCCACGTCACCGCAATTCTCTTAGCGGATTTAAAATTATTAAGCTCCGAAATGGGCCGATTAGCAATTTCTTCATCCATGGTGAGTGGATTCATTTCGTTATTGTGGGTTGCCATTTTGTCTGCAGTGAGACAATCAGAATCAAAGAAAGACAGCAGTACTTTTAATTGGATGACAATGTCTTTGGTCGTTATGATCATTTTCATCATATATGGTTTACGGCCAATAATGTTATGGATGATACGAAAAACACCCGAAGGGAAACCAATCAAAGAATCATACATATTTTCGGTGTTTTTAATGGTTTTGGGCTGCGCATTATTTAGCGAATATATAGGACAACATTTTATGATTGGGCCTATTATTTTTGGTATGGCTGTACCTGATGGGCCTCCATTAGGGTCAGCATTGAGTGAAAGATTGGATGCATTGGTGACAACCATATTTTTGCCATTATATTTTCTTTATAGTGGTATTAGATTTGATCTTTATATACTTGATGCTCAAAGTTTTGCAATTGTGCAAGTTCTTGGTATAGTTGCAAGCATTGGGAAGGTTGTAGGAACTTTGTTGCCTTCAATTTTTTCGAAGATGCCACTTACTGATGTTCTATCTTTAGGACTAGTTATGAGTACTCAAGGCATCACACAATTGCTTTACTTGCAGTCTTCTCTACACCTTGATATTTTGGATGAACAATCATATGGTAATGCGTTGATAGCTCTACTATGGTTGACAGGAGTTACAGCACCAGTTATAAAATTCCTATATGATCCATCTAAGAGATATTTGTCTTTAAATAGAAGAAGAACCATTGAACAATCAGCTTCAGATATTGAATTACGTCTCATGGCATGTATACATAATCAAGATGACACATCATCCATAATTAATCTTCTTGAAATGTCAAACCCTTCATTGGAAAATCCAATTTGTTTCTATGTTCTACATTTACTTGAACTAAAAGGAAGATCTGCACCACTTTTCATAGATCATCAACCATCAAACAACAAGTTGAATGAGCCGCATTCGAATCATTCTCAACACATAATAAACGCGTTTAGATCGTACGAGAAACAAAAATCGAACAATGTTGTTGTGAAACTCTTCACATCGATCTCGCCTTATGAGACGATGCACGATGAGATATCTATGCAAGTTGATGAAAAGAGAGTTTGTTTGTTGATTGTGCCTTTTCATAGACAATGGAGACCAACTGGGGTTACGGAATCAGCTCAGCCGATTCGAGCCCTAAATCGTCATCTACTCAGGACGGCACCTTGTTCAGTTGGGATTCTAATCGAACGCGGAAATTTGTGTAGGAACAACCCTTTAACATCGGTCTTGTTTTATAGTGTTGGAATACTTTTCATAGAAGGAGCCGACGATCGCGAAGCATTAGCTTACGCGATGCGAATGGCAAATCATCCGAACGTACGGATAACCCTAATTCGATTAATGGAACCTCGAAAGAAAAATAGAAACTTGATGCATAGGGATCCGGACGGCGATTTGATTCATAGGTTTAAAGTGGACTGTATCCAAATTAAACGACACGATTATCGGGAGGAAATCGTACGAGATAGTGTGGAAATGATAAATGTTATAAGGTCACTTGAAGGTTGTTTTGATTTAATTTTGGTTGGTAGAAGACATGCAACTGAAACAAATTTGTTTAGTGGATTAACTGAATGGAATGAATTTCCAGAACTTGGTCCTATTGGAGACATGTTAGTGGCTTCTGATTCAACTTTTGATGGTTCTGTTTTGGTGATTCAACAACAAAAGAGATCAGGAGTTGGTTATCAAGATTTGCATTTAGATTCTGGTATCAGTACAATGCAAGAATCAGTAACCATTGTGGAAGTACCTCGTGGTAGAAAGGTGTGGCCTATAACTTAA 2463 0.3711 MAETRVNATITDVTNNGTIWICERMFRYQRSKGIFFNDNPFSFTLPVLFLQTSLVSVSTTILRHIFEPVGQSTFFPQLLAGVVLGPSVIGQNAFIKKWLFPPKTFYISETIAFFGSMMYMFLIGVKLDVSGVTKTGKKAWAIGIFSFLIPLMMTLMIALILRKIFLTPDKGLYESIFSIVFIFSTGSFHVTAILLADLKLLSSEMGRLAISSSMVSGFISLLWVAILSAVRQSESKKDSSTFNWMTMSLVVMIIFIIYGLRPIMLWMIRKTPEGKPIKESYIFSVFLMVLGCALFSEYIGQHFMIGPIIFGMAVPDGPPLGSALSERLDALVTTIFLPLYFLYSGIRFDLYILDAQSFAIVQVLGIVASIGKVVGTLLPSIFSKMPLTDVLSLGLVMSTQGITQLLYLQSSLHLDILDEQSYGNALIALLWLTGVTAPVIKFLYDPSKRYLSLNRRRTIEQSASDIELRLMACIHNQDDTSSIINLLEMSNPSLENPICFYVLHLLELKGRSAPLFIDHQPSNNKLNEPHSNHSQHIINAFRSYEKQKSNNVVVKLFTSISPYETMHDEISMQVDEKRVCLLIVPFHRQWRPTGVTESAQPIRALNRHLLRTAPCSVGILIERGNLCRNNPLTSVLFYSVGILFIEGADDREALAYAMRMANHPNVRITLIRLMEPRKKNRNLMHRDPDGDLIHRFKVDCIQIKRHDYREEIVRDSVEMINVIRSLEGCFDLILVGRRHATETNLFSGLTEWNEFPELGPIGDMLVASDSTFDGSVLVIQQQKRSGVGYQDLHLDSGISTMQESVTIVEVPRGRKVWPIT 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03872 820 PANTHER CATION/H + ANTIPORTER 29 784 - -
Trre9g03872 820 Pfam Sodium/hydrogen exchanger family 55 439 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre9g03872 820 Gene3D - 47 451 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03872 Trre-Chr9 46902688 46906907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03872 31 812 Antiporter Super Family AT2G13620 35.062 6.97e-161 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03872 K26731 - mtr:11413669 1102.81