Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03869 ATGGCTTATGCAATCCCCTTTATTATTTTAATTCAAGTTTGCACGATTATGAATGTTATTGCTACAAGCAATGACTTGAAATTGAGACCAAAATTCTCATCTATTTTAGTCTTTGGGGACTCAACAGTAGACACAGGAAATAACAACTACATCAAAACATTGGCCAAAGGAAATCATTTACCATATGGTAGGGATTTTCCTAATCATGTACCTACTGGTAGATTTTCTAATGGAAAATTGGCTATTGATTTTCTTGCATCTACAATGAATCTCAAAGACACTGTCCCTCCATTTTTAGATCAAAATCTTTCAAATGTAGAGCTTCTAACAGGTGTTAGCTTTGCATCCGGAGGATCGAGTTTTGATGATTTGACAATAGCTTTATCCGGCACTATATCAATTTCCAAACAAATTGAATATTTCAAAAATTATGTGGTAAAGATTAAAAGCATTGTAGGGGAAAAAGAAGCTAAAAATAGACTTGGAAATGCTTTGTACAACATTAGTGGATACCAAGATTATATTCAAAGTAGACTTCAAATTTTCATTGAGGAACTATATGACCTTGGATGCAGAAAATTTGCTGTGGCTGGGCTTCCTGCAATTGGTTGCATACCTGTTCAAATAACAGCTAAGTTTGTAAATTTAAAGGATCGGAAATGTGTGGAGGATGAGAATTTAGAAGCTAAAGTTTACAACCAAAAATTGGCACGGAGATTACTTAAACTAAAAGCAAGGCTTCAAGGAAGCAGAATTATTTATACAAACATATATGATCCTTTGATTGGCCTTATCAATCATCCTCAAAAATATGGTATCACGGAAACAAATAAAGGGTGTTGTGGAACTGGCTTATTTGAAGTAACTCCATTATGTAATGAACTCACACCAGTTTGTAATGACGCTTCAAAATATGTATTTTGGGATAGTGTACATCCAACTGAAGCAACATACAAATATATTGCTAAGTACTTAGAATTGGAAGTCCTGCCTAAGTTCCAATTTCATAGGGATTATATATTTGATTGA 1029 0.3372 MAYAIPFIILIQVCTIMNVIATSNDLKLRPKFSSILVFGDSTVDTGNNNYIKTLAKGNHLPYGRDFPNHVPTGRFSNGKLAIDFLASTMNLKDTVPPFLDQNLSNVELLTGVSFASGGSSFDDLTIALSGTISISKQIEYFKNYVVKIKSIVGEKEAKNRLGNALYNISGYQDYIQSRLQIFIEELYDLGCRKFAVAGLPAIGCIPVQITAKFVNLKDRKCVEDENLEAKVYNQKLARRLLKLKARLQGSRIIYTNIYDPLIGLINHPQKYGITETNKGCCGTGLFEVTPLCNELTPVCNDASKYVFWDSVHPTEATYKYIAKYLELEVLPKFQFHRDYIFD 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03869 342 CDD SGNH_plant_lipase_like 34 325 IPR035669 -
Trre9g03869 342 Gene3D SGNH hydrolase 22 329 IPR036514 -
Trre9g03869 342 Pfam GDSL-like Lipase/Acylhydrolase 35 325 IPR001087 GO:0016788
Trre9g03869 342 PANTHER GDSL ESTERASE/LIPASE EXL3 166 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03869 Trre-Chr9 46881431 46884264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03869 11 323 Pollen Coat Proteome AT1G75930 32.070 1.69e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03869 - - gmx:100817270 508.449