Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03867 ATGGAGAATATTAGGATTTTTTTCAAGTATCATTGGATTCACTTCTTATGCATTAAGCTCTTCTTTCAATCATCTTTTTGGAAATTGGAACTTCATCAAAATCATTATCTACACAGTGATTCTCGACTACATGAAATCGGAACATTAAGAGTGGAAGATGATGTAGCTATAGAAATTGATACAGTAGATGGTAACAGAAATGAGATGCAATCTGATTATGGTAACCAAGAAAATCATTCTTTAAGAAGAAGAATGAATAATGATGATGGTTATAATTGGAAAAGATATGAAGAAAAATTTGCAAAAGGAAGTGATAATCAGAAAAGTTACTATAAATGTATGTGGCCTAATTGTTTTGTGAAGAAAAAAGTTGAGAGAAATATTGATGGTGAAATTATTGAGACAATATATAAAGGTACACATAATCATTGGATGCCTACTATGTCTACAATGAAGAAGAATTCATCATCTGAATATCTTTATTCACTTTTGCCTTCAGAAACTCGCTCTATTGATTTTCTAAATCAATCATTTGGCGGTGAAAAATTGGATTCTGATGAAGAACTTGCAAAGTCCTCGGTATCAATATGA 591 0.3063 MENIRIFFKYHWIHFLCIKLFFQSSFWKLELHQNHYLHSDSRLHEIGTLRVEDDVAIEIDTVDGNRNEMQSDYGNQENHSLRRRMNNDDGYNWKRYEEKFAKGSDNQKSYYKCMWPNCFVKKKVERNIDGEIIETIYKGTHNHWMPTMSTMKKNSSSEYLYSLLPSETRSIDFLNQSFGGEKLDSDEELAKSSVSI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03867 196 ProSiteProfiles WRKY domain profile. 87 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre9g03867 196 Gene3D WRKY domain 73 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre9g03867 196 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 82 155 IPR044810 GO:0003700
Trre9g03867 196 Pfam WRKY DNA -binding domain 88 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre9g03867 196 SMART WRKY_cls 87 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre9g03867 196 SUPERFAMILY WRKY DNA-binding domain 85 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03867 Trre-Chr9 46877121 46878066 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03867 88 150 WRKY Transcription Factor Family AT2G03340 46.875 4.60e-15 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre9g03867 WRKY 3.5e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03867 K13424 - mtr:11415730 248.825