Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03865 ATGATTGGAAGAAGGATTCATGCTTCGAAGGTCGCTCTTAGAATATTATTTCCCAGTGAGCGTCGCCTCTATGATAAGATCTTCTCGGGATCCAACTTTTTATCATCTGATCTTTGGTTTTCTGAGGTTTGTCGTGGAGCAACGATGCAGTTGTTGAACTTTGCAGATTCGTTTGTGAATCAAAGTCCTACGGCATGGCGTTTGTTTAAAATCCTTGACTTATTTGAGACACTCTGTGATCTCATTCCTGAATTTGAAGCACTGTTTACTAACTCCGTAGTGAACGAAGCGATAAAAACAAAGAATAGATTGGGTGAAGTAAGTAGAAACATTTTCATGGAATTTGGCAATCTGATCCTTCTTACGCCGGATGCAGAGTTAGATCGTTGGGTTGACGGTGGGGTTGATCCAATGACCTGCGAGGCTGCAGGATACATCGTTATGGCTTTCAGGTCAAGACAGAAACTGGAGCAAATTTTACGAGAATACCCCTCGGTTGAAGCTAATGGAGCGGGAACATCTTTATTCGATTCACAGATGGAGTTGATAATGGAGAAGTTTGAGAGAAATTTGGAAGCTAAGTGA 585 0.4171 MIGRRIHASKVALRILFPSERRLYDKIFSGSNFLSSDLWFSEVCRGATMQLLNFADSFVNQSPTAWRLFKILDLFETLCDLIPEFEALFTNSVVNEAIKTKNRLGEVSRNIFMEFGNLILLTPDAELDRWVDGGVDPMTCEAAGYIVMAFRSRQKLEQILREYPSVEANGAGTSLFDSQMELIMEKFERNLEAK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03865 194 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 194 IPR004140 GO:0000145|GO:0006887
Trre9g03865 194 SUPERFAMILY Cullin repeat-like 6 194 IPR016159 -
Trre9g03865 194 Gene3D Exocyst complex component Exo70 1 194 - -
Trre9g03865 194 Pfam Exo70 exocyst complex subunit 4 194 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03865 Trre-Chr9 46875407 46875991 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03865 2 194 EXO70 exocyst subunit family AT5G58430 48.223 3.07e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03865 K07195 - psat:127118474 267.314