Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03864 ATGCTGAATAATATAAGTGTGATTAAGTACAAATTGGAAACCTTTTGGGATGATAGGTTTTGTAATAACACAAGGCAATACTTGGAACTCTATTGTAAAAGCTCATGGAGTAAGGTTTCAGCTATTTTGAAAACGAGTAGTATTGAGTCAGCGGCGTCCAATTCTGAAGTAGATTCGATGAAAGACAAGCTCAATCTGTTCAATCGAAAGTTTAAGGAGATGTGTGGAATTCAGTCTACATGGCGTGTTCATGATGAACAACTTAAGAAACAAATAATAATTTATGTGGAAACTATGATGTTGCCGGCTTATGAAAACTTCATTACGAGGTTTGAGAATGTTCTTGGTGAAAATGCCAAAGAGTATAGAATGACTGACATTCAAACTCAACTCAACCATTTGTTTCTGGTACAGCATATTGATGTTGATTCTGTTAGAGGATCAGTAAGGAATCAATTAGTTAGTTAG 468 0.3504 MLNNISVIKYKLETFWDDRFCNNTRQYLELYCKSSWSKVSAILKTSSIESAASNSEVDSMKDKLNLFNRKFKEMCGIQSTWRVHDEQLKKQIIIYVETMMLPAYENFITRFENVLGENAKEYRMTDIQTQLNHLFLVQHIDVDSVRGSVRNQLVS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03864 155 Gene3D Exocyst complex component Exo70 1 137 - -
Trre9g03864 155 SUPERFAMILY Cullin repeat-like 1 135 IPR016159 -
Trre9g03864 155 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 135 IPR004140 GO:0000145|GO:0006887
Trre9g03864 155 Pfam Exo70 exocyst complex subunit 9 132 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03864 Trre-Chr9 46874903 46875370 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03864 16 135 EXO70 exocyst subunit family AT5G58430 38.400 1.20e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03864 - K07195 psat:127118474 186.808