Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03861 ATGAATGGAAAACCAGATGCATATAGTCTGATTTCATGTGCTGCCTTCGCTTTCATGTCACTTAGTTTATCGAGACAAATACAGTGCGGATTTGAAGTGGATTTTATGTACTTTTATCTAGGATGTTTAATTGTACAACTCATGCAGATTAATTTATTGTTAGTTATTGTTGGAGTTTGTTATAGCTATTGTCTTATTATTCTTCGTTGTTCTTTCTCTTCATTAAATATTCCACATGAAACTCCGTGTATTGGACACGAAGAACAAGGAGTAGTCATCCAAGTTGATTCAGAACAACGAGAAAATACCAACCGTGGTCATATCGTGCAACACTTTCATACAAGTTTGGAACTATTGTTGCAACAGTTCCTGACTTGTATGAAAAAGGTTAGCCAGAATAATTCTAATATTGCCAAGATGCTTTTGGAGAAGGTGAAAGGTAACTATAAGTTGGTGGTGACTGATCATAACTTCATTATTGATGCCATTGCTGCTGAAACAATCAATAATCTTCGTGAAACGGTTAAACTGATGGTGGATGCTGGGTTTGAGAAAGAGTGTTCCGACTTGTACATTAGTTTGCGTAAAGAATGGTTGAAAGATTTATTAATAAATAAATTATTAGGATTGAGAAAGATGGGATTTCAGGATTACATGATTGGAAGATGGATTAAAGCTTCAGAGGCTCTTAGAATATTATTTCCCAGTGAGCGTCGCCTCTATGATCATGTCTTCTCGGAATCCTTCTTTACATCATCTGATCTTCGTTTTTCTGAGGTTTGTCATGCGGCAACGATTCAACTGTTGAACTTTGCAGATTCGTTTGTGAATGGAAGTCCTTCGGCATGGCGTTTGTTTAAATTCCTTGACATGTTTGAGACACTGTGTGATCTCATTCCCGAATTTGAAACGTTGTTTACCGATTCATTGGTGAATGAAGCAATAAAAACAAAGAATAGATTGGGTGAAGTAAGTAGAGATAATTTCATGGAATTTGGCAATCTGATCTTTCTTACGCCGGATGCGGAGTTAGATTGTTGGGTTGATGGTGGGCATCATCCACTGACCTGCGAGGCTACAGGCTACATCTTTTTGGCTTTCTGCTCAAGACAGAAACTGGAGCAAATTTTACGAGAATACTCCTTGGTTGTTACCGAAGCGGGAACATCTTTATTCGATTCGCATATGGACTTGATAATGGAGCAGTTTGAGAGAAATTTGGAAGCTAAGTCACAAATTTATGAGGACCCCACTTTGCGGTATTTTTTCATGCTGAATAATATAAGTGTGATTAAGTACAAATTGGAAAACTTTTGGGATGATAGGTTTTTTAAAAACACAAGGCAATACTTGGAACTCTATTGTGAAAGTTCATGGAGTAAGGTTATAGATATTTTGAAAATGGATATAAATGAGTCATCGGCGTCAAATTCTGAAGCAGATTCAATGAATGACAAGCTCAATCTGTTCAATCAAAAGTTTAAGGAGATGTGTGGAATTCAGTCTACATGGCGTGTTTTTGATGAACAGCTTAGGAAACAAATAATAATTTATGTGGAAACTATGTTGTTGCCGGCTTATGAAAACTTCATTGCAAGGTTTGAGAATGTTTTGTGTAAAAATGCCGATGAGTATAGTGTTTGA 1644 0.3662 MNGKPDAYSLISCAAFAFMSLSLSRQIQCGFEVDFMYFYLGCLIVQLMQINLLLVIVGVCYSYCLIILRCSFSSLNIPHETPCIGHEEQGVVIQVDSEQRENTNRGHIVQHFHTSLELLLQQFLTCMKKVSQNNSNIAKMLLEKVKGNYKLVVTDHNFIIDAIAAETINNLRETVKLMVDAGFEKECSDLYISLRKEWLKDLLINKLLGLRKMGFQDYMIGRWIKASEALRILFPSERRLYDHVFSESFFTSSDLRFSEVCHAATIQLLNFADSFVNGSPSAWRLFKFLDMFETLCDLIPEFETLFTDSLVNEAIKTKNRLGEVSRDNFMEFGNLIFLTPDAELDCWVDGGHHPLTCEATGYIFLAFCSRQKLEQILREYSLVVTEAGTSLFDSHMDLIMEQFERNLEAKSQIYEDPTLRYFFMLNNISVIKYKLENFWDDRFFKNTRQYLELYCESSWSKVIDILKMDINESSASNSEADSMNDKLNLFNQKFKEMCGIQSTWRVFDEQLRKQIIIYVETMLLPAYENFIARFENVLCKNADEYSV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03861 547 PANTHER EXOCYST COMPLEX PROTEIN EXO70 108 536 IPR004140 GO:0000145|GO:0006887
Trre9g03861 547 Gene3D Exocyst complex component Exo70 96 546 - -
Trre9g03861 547 Pfam Exo70 exocyst complex subunit 223 545 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03861 547 SUPERFAMILY Cullin repeat-like 120 545 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03861 Trre-Chr9 46859578 46861221 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03861 153 545 EXO70 exocyst subunit family AT5G58430 43.675 2.37e-96 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03861 - - psat:127118474 768.459