Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03859 ATGAAGATTAACTATTTCTTAGCTATTGTTGGAGTTTGTTATAGCTATTGTCTTATTATTCTTCGGTCTTCATTCTCTACTTTAAATGTTATACCGGAACCGCAGTGTCTTGAACTCGAAGAACAAAGAGTAGTCATTCAAGTTGATTTTCAAAAAGAAGATACTGATAGTGGTTGTATCATGCAACAGTCTCATACAAGTTTCGAACCATTGTTGCAACAGTTTCAAACTTGTATGAAAGAGCTTGAGCAAAATAATTCCAACAATGCCAAGATGCTTATAGAAAATGTGAATGGTAACTATAAATTGGTAGTGACTGACCACAACTTCATAACTGATGCGCTTCCTCATGAAACAATCAATAATATTCAAAAATCGGTGAAATTAATGGTGGATGCTGGTTTTGAGAAAGTGTGTTTCGAGGTTTACAATGGCTTCCGTAAGGAATGGTTGGAGGATTTGTTAGGAAAGATGCGATTTCAAGATTACGTGATAGGAAAATGGATTAAAACTTCAGAGGTTGCTCTCCGAGTTTTATTTCCTAGTGAGCGTCGACTCTACAATCGTGTCTTCTCGAATTCAATTTCTGCATCATCTGACCTCTATTTCTCAGAGCTTTGTCGTGGATCGATCACCAAACTACTGAACTTTGCCGATTCATTTTCAAATAAAAGCCCTTCAGCATGGCGTTTGTTTAAAATCCTTGACTTGTTTGAGACTTTGTGTAGTCTAATTCCTGAATTTGAATCGTTATTCATTGATTCGTTGGTGAATGAAGCAATAAAAGTCAAGAATAAATTGGGTGAAATAAGTAGAGACATTTTTATGGAATTCGGGAATCTGATATTCCTTACACCGGATGCGGAGTTTGATTGTTGGGCTGATGGTGGAGTTCATCCAATGACCTGTGCAGCCACTGGCTACATCGTTATGGCTTTCTGGTCAAGACAAAACCTAGAACAAATTTTACAACAATATCCCTCGGTTGATGCTGATAGAACGGGGATATCTTTATTCTATTCGCAGATGGTGTTGATAATGGAGCAGTTCGAGAGCAAATTGGAAGCTAAGTCACAAATTTACGAGGACCCTGCATTGCGCTATTTTTTCATGATGAATAATCTAGGGCACGTTACATACAGATTGGAAACCTTTTGGGATCATAGGTTCTGTACAAATGTGGAGCAATACTTTGAACTCTATTGTAGGAATTCTTGGAATAAGGTGATAAATGTTTTGAAGATTGATATGAATGAGTCAGTGGCACCTAATTCTGAAACAGATTCAATGATAGATAAGCTCAATATTTTCAATCAGAAGTTTAGAGAGATGTGTGGAATTCAATCTACATGGCGTGTGCTTAATGAGCAAGTAAGAAACTTCATAATAACTTCTATAGAAACCATCTTGTTGCCTGCTTATGAAAACTTCATTGGTATGTATCATAATATTGTTTGTAAAAATGCTGATGAGTATATCGAGTATGGAATATTTGACATTCAAGATCATCTCAATCGTTCATTTATATTACAGGATGTTGATTCTGTGAAAGGATTAGATGAAAATCAGTTAGTTAGTTAG 1581 0.3605 MKINYFLAIVGVCYSYCLIILRSSFSTLNVIPEPQCLELEEQRVVIQVDFQKEDTDSGCIMQQSHTSFEPLLQQFQTCMKELEQNNSNNAKMLIENVNGNYKLVVTDHNFITDALPHETINNIQKSVKLMVDAGFEKVCFEVYNGFRKEWLEDLLGKMRFQDYVIGKWIKTSEVALRVLFPSERRLYNRVFSNSISASSDLYFSELCRGSITKLLNFADSFSNKSPSAWRLFKILDLFETLCSLIPEFESLFIDSLVNEAIKVKNKLGEISRDIFMEFGNLIFLTPDAEFDCWADGGVHPMTCAATGYIVMAFWSRQNLEQILQQYPSVDADRTGISLFYSQMVLIMEQFESKLEAKSQIYEDPALRYFFMMNNLGHVTYRLETFWDHRFCTNVEQYFELYCRNSWNKVINVLKIDMNESVAPNSETDSMIDKLNIFNQKFREMCGIQSTWRVLNEQVRNFIITSIETILLPAYENFIGMYHNIVCKNADEYIEYGIFDIQDHLNRSFILQDVDSVKGLDENQLVS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03859 526 Gene3D Exocyst complex component Exo70 49 513 - -
Trre9g03859 526 Pfam Exo70 exocyst complex subunit 167 505 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03859 526 PANTHER EXOCYST COMPLEX PROTEIN EXO70 75 504 IPR004140 GO:0000145|GO:0006887
Trre9g03859 526 SUPERFAMILY Cullin repeat-like 67 506 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03859 Trre-Chr9 46846307 46847887 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03859 105 508 EXO70 exocyst subunit family AT5G58430 41.419 1.64e-101 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03859 K07195 - tpra:123922483 765.377