Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03856 ATGACACATATCCAAATCCAAATCCGGAGATGGCTGATGCAGCAAAAGGTGTGGAGATTTTTGGGATTTGCTTCATCTGTTGTTGGACTTGTCTGTTATGCTCTCAGCTCATCCTTCAATCATCTCTTTGGAGATTGGAATCTGTTAAAGATTTTTCTTTACAGTGTTTTCAGCTTCATCATCAGCCTCATGATTTTATTTGCAAACATATGGCAACACTCAACAAGTCTTCGGTTCAAATCTCACACAGCGTTTTTGGTATTAACAATCACTTCACTTTATTCATTTTTCTTAGATAAAGTGGTGACTGGAAAACCAGATGCCTATAGTCTTATTTCATGTTCTTCCTTTGCTATCATGTTACTCAGTTTATCGAGGCAAATTGAGTGCGGATTTGAAGTTGATCTTCTTTACTTTTTTCTTGGATGTCTAATTGTGCAACTCATGAAGATTAAACTGTTGTTATTCATTCTTGGAGCAGGTTTCAGCTACGTGCTTATTATTCTTCGTTCATCCTTTCCTTTCTTAGACGTAGCACGAGATAATGAATTCCCTAGAATCGAAAATGAAAATTCCGTAGTTGTAGAAGTCCATTCACATTCACCACAACTGGCTAGTAATATGGTGGAGCAACTCAGTGCTTCTCTGAAGGCGCTTCAGCTAGAAAATTCAAATCTCATCGAAATGCTTTTGGAGAAGTTGAATGAATACCTTGGTGATTATTCTGAATTGACTGTTTATGACCTCGATTTCTTGATCAATGCCTTGCCACCTGAAACCATTGACAACCTTAAAAAAATAGCGAAGATGATGGTTAGCACCGGGTTTGAAAGGGAATTCTATGACATGTACAGCCATTGCCGGAGGGAATGTTTGGTTGAAAGCCTCTCATGA 894 0.3826 MTHIQIQIRRWLMQQKVWRFLGFASSVVGLVCYALSSSFNHLFGDWNLLKIFLYSVFSFIISLMILFANIWQHSTSLRFKSHTAFLVLTITSLYSFFLDKVVTGKPDAYSLISCSSFAIMLLSLSRQIECGFEVDLLYFFLGCLIVQLMKIKLLLFILGAGFSYVLIILRSSFPFLDVARDNEFPRIENENSVVVEVHSHSPQLASNMVEQLSASLKALQLENSNLIEMLLEKLNEYLGDYSELTVYDLDFLINALPPETIDNLKKIAKMMVSTGFEREFYDMYSHCRRECLVESLS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03856 297 Gene3D Exocyst complex component Exo70 183 297 - -
Trre9g03856 297 SUPERFAMILY Cullin repeat-like 223 297 IPR016159 -
Trre9g03856 297 Coils Coil 209 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03856 Trre-Chr9 46838505 46839398 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03856 248 297 EXO70 exocyst subunit family AT5G58430 48.000 7.52e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03856 - - tpra:123923139 383.259