Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03855 ATGTTGCCATGGAAGGAAATGGAATACAATATTAAAAGATGGATTAATGCTTCCAAAGTAGCATTGAAAATATTGTTCCCCACTGAACGGAGACTCTGCGATCAGGTTTTCTTTGGATTCTCCACCACTGCTGATTTATCCTTCGTGGATGTTTGCATGGAATCCACACTTCAGCTGCTGAGTTTCGCAAAAGCTATGGCCATCGTTAGACGATCACCCGAACCTGAACGGTTTTTTAGATTCCTAGACATGTTTGAAACTATGCATGACCTAATTCTAGAGTTTAAGTCTTTGTTCCGTGATCAGTACAGTGGGTCGCTGCAAAACGAAGCAGCCACAATTTTGAAGGGATTAGGGGAAGCAATCAAAGGCATTTTCATGGAGTTGGAGAATCTGATTCGCAATGATGCGGCCCAATTGGCTGTTCCCTTTGGTGGGATTCATCCAATTACCCGTTATGTGATGAACTACCTCCGTGCCGCAAGTAGGTCACGGCAGACATTGGAACAAGTGTTTGAGGATAGAGTGAATTCCTCTTTTTCTCTTTCAGTGCAGATGGGTTTGATTATGGAGCTACTAGACAGCAATTTGGAAGCCAAATCCAAAATCTACGAGGACCCTACTTTGTGCCATGTTTTCTTGATGAATAACTGCAGGTACATTGTTCTACATATCAAAGACACTGAATTGGGAAGCATTTTAGGTAATGCTGTGATCCAAAAACACACAGCAAAAGGTCGGCAGCATCATGCGAACTATCAAAGAAACTCATGGAATAAGGTGTTGGAGTTTTTGAAGTTGGATAGCAATGCATCAATGCAACCTAATGAGGAAGCAAATTCAATGGAAAAGAAATTAAAATCATTCAACATGCTCTTTGAGAAAATATGCAGGGTTCAATCTTCATGGTTTATCTTTGATAAACATCTTAAGAGAGAAATAATAACTTCCATTGTGAAACTCTTGTTGCCAGCTTATGCAAAATTCATTAGAAGGTTTCGGAGAGTTCTTCAGCTTGGTAAGAATGCTGATAAATTTATTAAGTATGAAATTGAAGATATCGCAATGGGACTCGACGATTTGTTTCAGGGAAGTGGTAAATCCAATTAA 1110 0.3973 MLPWKEMEYNIKRWINASKVALKILFPTERRLCDQVFFGFSTTADLSFVDVCMESTLQLLSFAKAMAIVRRSPEPERFFRFLDMFETMHDLILEFKSLFRDQYSGSLQNEAATILKGLGEAIKGIFMELENLIRNDAAQLAVPFGGIHPITRYVMNYLRAASRSRQTLEQVFEDRVNSSFSLSVQMGLIMELLDSNLEAKSKIYEDPTLCHVFLMNNCRYIVLHIKDTELGSILGNAVIQKHTAKGRQHHANYQRNSWNKVLEFLKLDSNASMQPNEEANSMEKKLKSFNMLFEKICRVQSSWFIFDKHLKREIITSIVKLLLPAYAKFIRRFRRVLQLGKNADKFIKYEIEDIAMGLDDLFQGSGKSN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03855 369 Gene3D Exocyst complex component Exo70 1 369 - -
Trre9g03855 369 Pfam Exo70 exocyst complex subunit 12 358 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03855 369 SUPERFAMILY Cullin repeat-like 2 362 IPR016159 -
Trre9g03855 369 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 364 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03855 Trre-Chr9 46837359 46838468 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03855 2 365 EXO70 exocyst subunit family AT5G58430 59.783 9.99e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03855 K07195 - gmx:100803694 458.373