Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03850 ATGGTTTTGGATCATAAAAAAGGACTTTCTGCTAAAGAAAACTCTCAATTGGTGGTGACTGACCCTAACTTCATGATGGATGTGCTGAAGCCAGAAACAATCAAAGGCGTTGAGGAAACAGCAAAGGTTATGGTGAGTGCTGGGTTACAAAAGCTAAGCATTGAGGAAGTTCATAATATACCGTGGAAGGATCTCAAAGACGAGATTGAAATATGGATTAGAGCTTCTAATGTTGCTCTCAACATACTTTTCCCTGGAGAGAGAAGACTCTACGATCGCGTTTTATTCGGATTCTCATCCATCGCTGATTTCTCCTTCATGGATATTTGCAAGGGATCCACCATTCGACTTTTGAATTTTGCTGATTTTGTTGCCACCAGAAGCTATTTGCCAGAGCATTTGTTTAAAATTTTGGAGCTGTTTGAAACATTGCGTGACCTAATTCCCGAATTTGAGTCATTATTTTGTGATCAATACAGTGTATCTCTAAGAAATGAAGCAATGACCATATGGAAGAGACTCGGGGAATCAATCAAAGGCATTTTCATGGAGTTGGTGTCTTCCTTTAATGGTTTCGACAATTTTTTTTCTTCTTTTTTCTATGGATTAAAAATCATTTTGTTGTGA 627 0.3796 MVLDHKKGLSAKENSQLVVTDPNFMMDVLKPETIKGVEETAKVMVSAGLQKLSIEEVHNIPWKDLKDEIEIWIRASNVALNILFPGERRLYDRVLFGFSSIADFSFMDICKGSTIRLLNFADFVATRSYLPEHLFKILELFETLRDLIPEFESLFCDQYSVSLRNEAMTIWKRLGESIKGIFMELVSSFNGFDNFFSSFFYGLKIILL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03850 208 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 186 IPR004140 GO:0000145|GO:0006887
Trre9g03850 208 SUPERFAMILY Cullin repeat-like 19 188 IPR016159 -
Trre9g03850 208 Gene3D Exocyst complex component Exo70 2 191 - -
Trre9g03850 208 Pfam Exo70 exocyst complex subunit 72 189 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03850 Trre-Chr9 46804258 46804951 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03850 19 185 EXO70 exocyst subunit family AT5G58430 56.771 8.66e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03850 K07195 - cam:101500706 251.906