Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03847 ATGTTCCCCGTGCGTTGCACGGGTATTAATACTAGTTGGAGACACTTAGAAAGGACAAATAGAAGAATGCAACTGATTGAAATTTTTGGCGATGTTTGGTTCCAAAGAAACAGAATAAAAGTCCAACAAAAACTTGAACTCTATCAAAGAGAGTCATGGGATAAGGTGTTGGAATTTTTAAAGTTGGATATTATCAATGACTCCAAGGAAATTAATTGTGCAATAGATTTGATGAAAGAAAAGCTCAGATTGTTTAACATGCACTTTACTGAGACATGTAGAATTCAGTGCACATGGTCTGTTCATGATGAGAAGCTAAGGGGAGAAATAATTTCATCTCTCAAAAACATCTTGCTGCCAGCATATGGAATCTTCATTGGGAAGTTTCAGGATTTTCTTAAAGACAAGGCTTACAAGTATATTGAGTATGGAATGTTTGACATTCATGATGTACTTGATAATTTGTTTCTCAGAACCAAAAAATACAAATACAGATGA 498 0.3454 MFPVRCTGINTSWRHLERTNRRMQLIEIFGDVWFQRNRIKVQQKLELYQRESWDKVLEFLKLDIINDSKEINCAIDLMKEKLRLFNMHFTETCRIQCTWSVHDEKLRGEIISSLKNILLPAYGIFIGKFQDFLKDKAYKYIEYGMFDIHDVLDNLFLRTKKYKYR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03847 165 Gene3D Exocyst complex component Exo70 10 165 - -
Trre9g03847 165 PANTHER EXOCYST COMPLEX PROTEIN EXO70 15 156 IPR004140 GO:0000145|GO:0006887
Trre9g03847 165 Pfam Exo70 exocyst complex subunit 13 153 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03847 165 SUPERFAMILY Cullin repeat-like 15 156 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03847 Trre-Chr9 46760730 46761227 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03847 33 156 EXO70 exocyst subunit family AT5G58430 43.651 4.11e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03847 - - mtr:11409580 227.639