Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03842 ATGAAGGCTGTTAATGCAGACAGAGCATTTTCAACACAAACTGAGGAGCCAATGAAACTATTAGAGAGAATTTTGGAATGGAAGTCTAAAAAACATGTGGACACTTCTTCGCATCATTTTTTCATCATGATGAATAATTGGAGATATTTAGAAGTTGCAATTCAAAGAAGGGAATTGAATGAAATTTTTGAAAATATCTGGTGCCAAAAATTCAGAGTAAAAGTTCAACAAAAGCATGAACTCTATCAACGAAACTCATGGGATAAGGTGTTGAATTTTTTGAAGTTTGATATCAAAGACTCATCCATGGAACTACATTTTGAAGAAAATCTCAGTTGTTTTAACATGCACTTTGCAGAGACACTCAGAATTCAGTGCACATGGTCTGTCCATGATGAGAAGCTAAGGGGAGAAATATTTTCATCTCTCAAAAACATCTTGCTGCCAGTGTATGGATCTTTCATTGCGAAGTTTCAAGATTTTCTTAAAAACGATGCTTACGAGTATATTGAGTATCGAATTTTTGACATCGAAGATGTACTAGATAGTTTGTTTCTTGGAAACAAGACAGATGAATGA 579 0.342 MKAVNADRAFSTQTEEPMKLLERILEWKSKKHVDTSSHHFFIMMNNWRYLEVAIQRRELNEIFENIWCQKFRVKVQQKHELYQRNSWDKVLNFLKFDIKDSSMELHFEENLSCFNMHFAETLRIQCTWSVHDEKLRGEIFSSLKNILLPVYGSFIAKFQDFLKNDAYEYIEYRIFDIEDVLDSLFLGNKTDE 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03842 192 Gene3D Exocyst complex component Exo70 2 192 - -
Trre9g03842 192 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 186 IPR004140 GO:0000145|GO:0006887
Trre9g03842 192 Pfam Exo70 exocyst complex subunit 8 182 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03842 192 SUPERFAMILY Cullin repeat-like 9 185 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03842 Trre-Chr9 46687828 46688406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03842 18 190 EXO70 exocyst subunit family AT5G58430 39.326 6.55e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03842 - - mtr:11412348 237.654