Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03837 ATGAAGCACATTATAATCCAAATTCAAAGACGGCTTATGCATACAAATGTATGGAGAGTTGTGGGCTTCACTTCAGCTGTTGTTGGATTGGTTTGTTATGCTCTCAGCTCTTCCTTCAACCATCTATTTGGAAATTGGAATTTGTTGAAAATATTTCTTTACTGTGTTTTCTGTTTCATCATCTGCTTGCTGATTTTATTAGCAATGATATGGAATCACTTGAGAAGTCTCAGGTTCCAAGTTCAATTCCCATTTTTGGTTTTAATCACCACCTCGGTGTATTCCTTTTTTTCTGATAAAATGATGAATGGAAAACCAGATGCATATAGCCTCATTTCAAGTGCTGCCTTTTCTATCATGTCACTAAGTTTTTCACGGCAAACTCAGTGCGGATTTGAAGTTGATCTTCTTTATTTTTTTCTCGGATCTCTAATTGTACAGCTCATGAAGATTAAGTTGCAGTTATTCATTGTTGGAGCTGGTTTCAGCTATTCCCTTGTTATTCTTCGTTCTTCCTTTCCTTCCATAGACGCAGGGCGAGATAATGAGTACCCTGAAATTCAAGATGAAAATTCAGTAGTCGTTCATGTCATTTCACCACACTTAGGTAGTACTGATATTGCTAGCAGCATGGTGGAACAACTCAGGACTTGTGTGTATGCAATTCAGAAGGAAAATTTTCATGTCATCGACACACTTTTGGAACAGCTAAAGGAATACTTTGTTGATGCATCTGAATTGGTGTTATCTCAAGGCAGCATGAGGGAGTCGTTCAAACAAATAGAAAATTGGAATCTTTTGATGGATGTGGTGCCACCTGAAACAATAAAAAACCTTCATGAAGCGACAAAGTTGATGGTGAGCACTGGTTTTGAAAAGGAGTGCTATAATGTGTACAGCAGTTCCCGGAGGGAGTGGTTGGAGGGCCTAATGGAACAATTATTAGGTTTAGAGAATCTAACTATTGAGGACGTTAACAAGATTTCATGGAATGATCTTAAGGACCAGATTAGAAGATGGGAAAAGGCTTCAAAGGTCGCTCTCAAGATATTGTTCCCCGCCGAGCGACAACTCTGCAATCTTGTTTTCTTCGGATTCTCCACAGTCACCGATCTCTCCTTCACAGAGGTTTGTAGGGGATGCACTAATTATTTGCTGAATTTCGGTGATGCAGTAGCAAATGGAAGTCGTTCGCCTGAGCGATTATTTAAAATCCTCGATATGTTTGAAACATTGCGTGACCTAGTTCCGGAGTTTGAGTCTCTATTTTGTGATCAGTACAGTGTATCGCTAAGGAATGAAGCAAACACAATTTTGAAGAAATTGGCAAAAGCAATAGTGGAAATTTTAATGGAGTTGGAAAATATGATTCACCAAGATCTTTCTAAGGTGGCAGTTCCTGGTGGAGGGATTCATCCCATTGTTCGTTACATTATGAACTACCTCAGACTCACCTGTGAATATCGACAGACACTGGAGCAGGTGTTTGAAGACCATAGACATCTGTTGAAGGAATACCCCAAACTTCATGATAGTGTGCCCTCCTCTTCCTCTCTCTCACTGCATATGGATCGAATTATGGAGGCATTGGAGATCAATACATACAAGATGAAACATAACGATATAAGTAAACTACTTTTATCGGATAATGTGATTCAAAAACACAAAGCAAAAGTTTTGTACAACTATGAGCAATATCAGAGAAGTTCATGGAATCAAGTGATGGAATTTCTGAAGTTGGACAACAATGGATCAGTGTCTCCTAAAATGTTAGTGAAATCAATGAAGAAGAAGCTCAACTCTTTCAACATACTTTTCGAGGAAATATGCAGGGTTCAGTCTTTGTGGTTTATCTTGGATGAGCAGCTTAAGGAAGAGATCATAATTTCTATTAAGAAAAATTTGTTACCGGCATACGGAAATTTCATTGGGATGTTCCAGAAGAGTGTTAAGAATAATGGAAAGCATGCTGACAAATATCTTAGGTATGGAATGGATGATATAGAAGCAAAACTCGGCGATTTGTTTCATGGAAGTAGTGCATCAACAGATAGCCGAAAGCAAAGCTAA 2070 0.386 MKHIIIQIQRRLMHTNVWRVVGFTSAVVGLVCYALSSSFNHLFGNWNLLKIFLYCVFCFIICLLILLAMIWNHLRSLRFQVQFPFLVLITTSVYSFFSDKMMNGKPDAYSLISSAAFSIMSLSFSRQTQCGFEVDLLYFFLGSLIVQLMKIKLQLFIVGAGFSYSLVILRSSFPSIDAGRDNEYPEIQDENSVVVHVISPHLGSTDIASSMVEQLRTCVYAIQKENFHVIDTLLEQLKEYFVDASELVLSQGSMRESFKQIENWNLLMDVVPPETIKNLHEATKLMVSTGFEKECYNVYSSSRREWLEGLMEQLLGLENLTIEDVNKISWNDLKDQIRRWEKASKVALKILFPAERQLCNLVFFGFSTVTDLSFTEVCRGCTNYLLNFGDAVANGSRSPERLFKILDMFETLRDLVPEFESLFCDQYSVSLRNEANTILKKLAKAIVEILMELENMIHQDLSKVAVPGGGIHPIVRYIMNYLRLTCEYRQTLEQVFEDHRHLLKEYPKLHDSVPSSSSLSLHMDRIMEALEINTYKMKHNDISKLLLSDNVIQKHKAKVLYNYEQYQRSSWNQVMEFLKLDNNGSVSPKMLVKSMKKKLNSFNILFEEICRVQSLWFILDEQLKEEIIISIKKNLLPAYGNFIGMFQKSVKNNGKHADKYLRYGMDDIEAKLGDLFHGSSASTDSRKQS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03837 689 Gene3D Exocyst complex component Exo70 204 686 - -
Trre9g03837 689 PANTHER EXOCYST COMPLEX PROTEIN EXO70 248 533 IPR004140 GO:0000145|GO:0006887
Trre9g03837 689 Pfam Exo70 exocyst complex subunit 537 673 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03837 689 Pfam Exo70 exocyst complex subunit 339 533 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03837 689 SUPERFAMILY Cullin repeat-like 234 677 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03837 Trre-Chr9 46670108 46672247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03837 259 682 EXO70 exocyst subunit family AT5G58430 50.444 1.26e-145 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03837 - - psat:127118479 882.478