Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03836 ATGTTTGAAACATTATGCGACTTAATTCCGGAGTTTGAGTCTCTGTTTTGTGACCAGTATAGTGTGTCGCTAAGAAATGACGCAAACACAGTTTCGAACAAATTGGGAGAAGCAATAGTGGCCATTTTCATGGATTTGGCAAATATGATTCACCATGACCCGGTGAAAGCGGCAGTTCCCGGTGGCAGGATTCACCCTCTTGTCCGTTATGTGATGAACTACCTTATCCTCACATGTGACTATCAGCAGACATTGGAGCAGGTGTTTGAAGACAATGGGCATCTGTTGAAGGAATACCTCAAGCTTGATGATATTGTGCCCTCCTCTTCCTCTTTTTCAGTGATAGATCATATTATGGAGGTATTGGAAAATAATTTGGAAGCCAAGTCGAAAGTCTATAATGATCCTGCTTTGTGTTGTGTTTTCTTAATGAATAGTAGCAGCTACATACTTAACAAGGCGAAAGATAATGAATTCGGGGAATTTTTAGGGAATGATATGATCCAAAAACACAAAGCAAAAGTTATTTACTACTATGAGCAATATCAGAGAATCTCATGTAATAAGGTGTTGGGATTTCTGAAGCTTGACAAGAGTGGATTAGTGCCTCCTAGTATGGTAGAGAAGCTCAAATCATTCAATATATTGTTTGAGGAAATATGCAAGGTTCAGTCTTTGTGGTTTGTCTTCGATGAACAGCTTAGAGACGTCATCAGAATTTCCCTTAAGAGAGACTTGTTGCCAGTGTACTGA 753 0.3944 MFETLCDLIPEFESLFCDQYSVSLRNDANTVSNKLGEAIVAIFMDLANMIHHDPVKAAVPGGRIHPLVRYVMNYLILTCDYQQTLEQVFEDNGHLLKEYLKLDDIVPSSSSFSVIDHIMEVLENNLEAKSKVYNDPALCCVFLMNSSSYILNKAKDNEFGEFLGNDMIQKHKAKVIYYYEQYQRISCNKVLGFLKLDKSGLVPPSMVEKLKSFNILFEEICKVQSLWFVFDEQLRDVIRISLKRDLLPVY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03836 250 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 250 IPR004140 GO:0000145|GO:0006887
Trre9g03836 250 Pfam Exo70 exocyst complex subunit 1 250 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03836 250 Gene3D Exocyst complex component Exo70 1 250 - -
Trre9g03836 250 SUPERFAMILY Cullin repeat-like 1 250 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03836 Trre-Chr9 46667399 46668151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03836 1 250 EXO70 exocyst subunit family AT5G58430 54.264 9.42e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03836 K07195 - psat:127118479 368.622