Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03835 ATGTTATTGAGTTTGTCGCGGCAAACTCAGTGCGGATTTGAGATCGATCTTATGTACTTTTTTCTCGGAAGTCTAATTGTGCAACTTATGAAGATTAAATTAGAGTTGTGCATTCTTGGAGTAGGTTTCAGCTATTTAATTATTATTCTTCGTTCTGTTTTCTCTTCTATAAATGTTGTATTATATAATGAAGATCTTCCTAGTGTTCAAGATGAAAATCTGGTTGCTATTGAAGTCAATTCACATTCACCACAACTGGCCAGTATTCGTAGTTTTATGGTGGAACAACTCAACACGCTTCGGCAAGAAAATTCAAATATTATTGACATGCTTTTGGAGCAGTTGAAAGAATACCTTGGTGATGATTCTGAATTGACAGTTTCTGACCCTAATTTCGAAGCAGTGCTTAGACCAAAAGAAAATTCGAATCTCATGATCGACTCTATGCCACCAGAAACAATTGAAAACCTTCAAAAAACTGCGAAACTGATGGTTGAAGCTGGATTCGAGATGGACTTTTATGACGTGTATATCAGTTGCCGGAGAGGATGTTTGGAGGAATGCCTCTCGAAGTTGGGCTTTCAAAAGGTTAGTGTAGAGGAAGTTCAGAATATGTCATGGGGGGACTTTAGAGACAAGATTGAAAGATGGATTAAGGCTTCAAACGTGGCTTTCAAGATATTGTTCCCCGCTGAGCGGCGATTATGTGATCAGATTTTCTTTGGGTTCTCCACTTTCGCTGATATATCATTCACAGGTGTTTGCAGGGAATCTACACTTCAGCTGCTTAATTTTGCCAATGCTATCGCCTTAGGAAGCCGATCACCGGAGACGTTGTTTAGAGTCCTCGATGTGTTTGAAACAATGCGTGACCTAATTGCAGAGTTTGAATCTATATTAAGTGGGTTGCTGCGAAATGAAGCAACCAATATTTGGAAGAGATTGGGGGAATCTATCAGAGGCATTTTCATGGAGTTAGAGAATCGGATTCGCCAAGATTCGGCAATGGGGGCCTCTTCCAGTGGTGGGCTTCATGGAATTACCCGTTATGTGATGAACTACCTTCGTGTTGCATGCGAGTCATGGCAGACACTGGAGCAAGTGTTCGAAGAAAACTGTGGCCATTTGTTGAAGGAATATCCCAAAATTGAGGATGGAATGCATTCTTCTTCGTTATCAATGCAGATGGATTCAATTATGGAGCTATTAGAGAACAATTTAGAAGCCAGAACAAAAATCTACAAGGACCCTGCTTTGTACTATGTATTCTTGATGAATAACTGCATGTACATGGTTCATAAAACCAAAGATAGTGAATTGGAAACCATTTTAGGTGATGCTGGGATTCAAAAATATACAGCAAAAATTCAGCAACACCGTGAGAAGTATCAAAGAAGCTCATGGAATAAGGTGTTGGACTTTTTGAAGTTGGACGGCAACGAATCAATCCAGCCTAATGAGGTAGCAGAGTCAATGAAACAGAAGCTGATGTCATTCAACATGCTATTTGATGAAATATGCAGGGTTCAAACTTCATGGTCTGTCATTGATGAACAGCTTAGGGAAGAAATAAGGATTTCCATTAAGAAAACCTTGTTGCCAGCTTATGGAAACTTCATTGGGAGGTTTCAAAGTGTTCCGCTGGAACTTGATAAGCATGCTGAGAAATATATTAAGTATGAAATAGAGGATATTGAAGCAAGAATCAACAGTTTGTTTCAGGGTAGCAGTTGA 1734 0.3945 MLLSLSRQTQCGFEIDLMYFFLGSLIVQLMKIKLELCILGVGFSYLIIILRSVFSSINVVLYNEDLPSVQDENLVAIEVNSHSPQLASIRSFMVEQLNTLRQENSNIIDMLLEQLKEYLGDDSELTVSDPNFEAVLRPKENSNLMIDSMPPETIENLQKTAKLMVEAGFEMDFYDVYISCRRGCLEECLSKLGFQKVSVEEVQNMSWGDFRDKIERWIKASNVAFKILFPAERRLCDQIFFGFSTFADISFTGVCRESTLQLLNFANAIALGSRSPETLFRVLDVFETMRDLIAEFESILSGLLRNEATNIWKRLGESIRGIFMELENRIRQDSAMGASSSGGLHGITRYVMNYLRVACESWQTLEQVFEENCGHLLKEYPKIEDGMHSSSLSMQMDSIMELLENNLEARTKIYKDPALYYVFLMNNCMYMVHKTKDSELETILGDAGIQKYTAKIQQHREKYQRSSWNKVLDFLKLDGNESIQPNEVAESMKQKLMSFNMLFDEICRVQTSWSVIDEQLREEIRISIKKTLLPAYGNFIGRFQSVPLELDKHAEKYIKYEIEDIEARINSLFQGSS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03835 577 Pfam Exo70 exocyst complex subunit 215 570 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03835 577 PANTHER EXOCYST COMPLEX PROTEIN EXO70 122 575 IPR004140 GO:0000145|GO:0006887
Trre9g03835 577 Gene3D Exocyst complex component Exo70 76 577 - -
Trre9g03835 577 SUPERFAMILY Cullin repeat-like 62 573 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03835 Trre-Chr9 46664326 46666059 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03835 120 577 EXO70 exocyst subunit family AT5G58430 57.359 1.02e-178 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03835 K07195 - psat:127118479 582.793