Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03834 ATGAAGCACATTATAATCCAAATTCAAAGATGGCTTATGCATACAAATGTATGGAGAGTTGTGGGCTTCACTTCAGCTGTTGTTGGATTGGTTTGTTATGCTCTCAGCTCTTCCTTCAACCATCTATTTGGAAATTGGAATTTGTTGAAAATATTTATTTACTGTGTTTTCTGTTTCATCATTTGTTTGCTGATTTTATTAACAATGATATGGAATCACTTGAGAAGTCTCAGGTTCCAAGTTCAATTCCCATTTTTAGTTTTAACCATTACCTCAGTGTATTCCTTTTTCTCCGATAAAATGATCAATGGGAAACCAGATGCATGCAGCCTCATTTCAAGTGTTGCCTTTGCTATCATGTCACTTAGTTTGTCGCGGCAAACTCAGTGTGGATTTGAAGTCGACCTTCTTTACTTTTTTCTTGGAAATCTTATTGTGCAACTCATGAAGATTAAATTGGAGTTATTCATTGTTGGAGCTGGTTTCAGCTATTCTCTTATTATTCTTCGTTCTTCCTTTCCATCCATTTCTGTAGATGAAGGATACCCTGGAATCCAAGATGAAAATTTGGCGGTTCTTCGTGTCATTTCACCTCAATTGGATTGTACTACTGATATTGCTAGTAGCATGATGGACCAATTCAGGACTTGTGTTACTGCGATTCAGAAGGAAATGTTTTATGTCATGGACATTCTTTTGGAACAGCTAAAGGAATACTTTGACGATGCATCTGAGTTGATGTTGTCAGAACGCAGCAATGATGGAGTGATCATATTGGAAGCACTGTGCCCGGAAACGGTCAATAACCTTCAGGAAATAGTGAAGTTGATGGTGAACGCTGGTTTTGAGAAGGAGTGCTCCAATATGTACAGCAGTTGTCGGAGGGAATGCTTGGAGGAGTGTCTAGTAAAACAATTATTAGGTTTGGGTAATCTTACTTTCGAGGAAGCTAGCATGATTTCATTTAAGGATCACAGACGCCGGATTAAAAAATGGATCAAGGCTTCCAAGGTTGCTCTCAAGATATTGTTTCCCACCGAGCGACAACTCTGCGATATTGTTTTCTTCGGGTTCTCTGCCATATCGGATCTCACTTTTACAGATGTTTGCAGGGAATGTGCCATTTATTTGCTGAATTTTCCCAATGCGTTAGTGAATGAATGCCATTCGCCAGTGCAGTTGTTTAGAATGCTCAACTTGTTTGAAACATTGGGCGACCTAATTCCGAATTTTGAGTCTCTTTTTTGTGATCAATACAGTGTGTCACTTACTAATGAAGCAAACACAGTTTTGAAGAAATTGGGAGAAGCAATAGTGTTCATTTTCACGGAGTTAGAAAATATAGTTCGCCAAGATCCGGTGAATGCGCCAGTTTGTGGTGGTGGGCTTCACCCCATTGTTCGTTACATGATGAAATACCTAACCAAAACATATGACAACCGTCAGACACTGGAGCAGGTGTTTGAAGACCATGGACATATGTTGCAGGAATACTTCAAGCTTAATGATAATGTGCCCTCCTCTTTCTCACTTTCGCTGCAGATGGAACGGATTATGGAGGTATTGGAGACTAATTTGGAAGCCAAGTCCAAAATTTATAAAGACCCTGCTTTGCAATATGTTTTCTTAATGAATAGCAGTGTGTACATAATTCGGAAGACGGAACACAGTGGCTTAAGGACTCTTTTTAAGAATGGCTTGATCAAAAGACACCAAGCAAAATTAAGGTACAACTATGAGCAATATCTGAGAATTTCATGGAATAAGGTGCAGGGATTTCTAAACCTGGACAACAATGGGTTAGTGCTTCCTGATATGGTAGAGAAGTCAATGAAGAAGAAGCTAGAATCTTTCAACATACTTTTTGAGGAAATGTGTAGGGTTCAATCTTTGTGGTTTGTCTTGGATAAAGAGTTTAGGGAAGAAATAATAACTTCCATTGCAGACATCTTGTTACCAGCCTATGGAAACTTCATTCAGAGGTTCCAGAGTGTTCTGGAACTTGAAAAGCATGCTGATAAATATACTATTAAGTATGGATCGGATGATATTGAAGCAAGACTCAGCAAATTGTTTAAGAAAATCATTCGAAAAAAGCGTGGCCGAACGCAGTGTTTAATAGAAACAGATGGTGTGTATTAG 2142 0.3875 MKHIIIQIQRWLMHTNVWRVVGFTSAVVGLVCYALSSSFNHLFGNWNLLKIFIYCVFCFIICLLILLTMIWNHLRSLRFQVQFPFLVLTITSVYSFFSDKMINGKPDACSLISSVAFAIMSLSLSRQTQCGFEVDLLYFFLGNLIVQLMKIKLELFIVGAGFSYSLIILRSSFPSISVDEGYPGIQDENLAVLRVISPQLDCTTDIASSMMDQFRTCVTAIQKEMFYVMDILLEQLKEYFDDASELMLSERSNDGVIILEALCPETVNNLQEIVKLMVNAGFEKECSNMYSSCRRECLEECLVKQLLGLGNLTFEEASMISFKDHRRRIKKWIKASKVALKILFPTERQLCDIVFFGFSAISDLTFTDVCRECAIYLLNFPNALVNECHSPVQLFRMLNLFETLGDLIPNFESLFCDQYSVSLTNEANTVLKKLGEAIVFIFTELENIVRQDPVNAPVCGGGLHPIVRYMMKYLTKTYDNRQTLEQVFEDHGHMLQEYFKLNDNVPSSFSLSLQMERIMEVLETNLEAKSKIYKDPALQYVFLMNSSVYIIRKTEHSGLRTLFKNGLIKRHQAKLRYNYEQYLRISWNKVQGFLNLDNNGLVLPDMVEKSMKKKLESFNILFEEMCRVQSLWFVLDKEFREEIITSIADILLPAYGNFIQRFQSVLELEKHADKYTIKYGSDDIEARLSKLFKKIIRKKRGRTQCLIETDGVY 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03834 713 PANTHER EXOCYST COMPLEX PROTEIN EXO70 223 693 IPR004140 GO:0000145|GO:0006887
Trre9g03834 713 Gene3D Exocyst complex component Exo70 199 699 - -
Trre9g03834 713 Pfam Exo70 exocyst complex subunit 330 689 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03834 713 SUPERFAMILY Cullin repeat-like 212 692 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03834 Trre-Chr9 46661513 46663654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03834 257 700 EXO70 exocyst subunit family AT5G58430 49.552 2.80e-143 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03834 - - psat:127118479 912.524