Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03833 ATGAAGATCAAATTGCAGTTGTTCATTCTTGGAACAGGTTTCAGCTACTCTCTTATTATTCTCCGCTCTTTTTTATCTTCTTTTGATGCTAGAGTAGATGATCAATACTCTCATCTCCAAGATGGAAACTCGGTAGTTCTTTGTATGGATTCTCTGCAGTTGACTAATACTGATATTGCTAGTGTTAGTAGTAGCAATAGCATCGATTCACCACAATTGGTGATCACTACTGATATTAGTAATGTGATGGAAAAACTCGGGACTTTTGTGAAGGAACTGCGAGAAGAAAATTTAAATTTCATTGAAATGCTTTTGAATCATGTTCTTGACTCTCAATTTGTTGCGACTGACCCTAACTTCATGATGGATGCGCTGAAGCAAGAAACTATCAAAGGCCTAGAGGAAACAGCAAAGGTTATGGTGAGCGCGGGGTTTGAGAAGGAATTTTCTGACGTATACAACAATTGTCGTATGGAGTGCTTACAAGAGTGCCTAATGCATAGATTATTCAGATTAAAGAAGCTCAGCAGTGAGGATGTTCGCATTATGCCATGGAAGGGTCTCGAAAACGAGATTAAAAGATGGATTAGAGCTTTCAATGTCACCCTCAAGATACTTTTCCCTGGCGAGCGACAACTATGTGATCGTGTCTTCTCCGGGTTCTCATCTGCTGCTGATTTCTCCTTCGTTGAGATTTGCAGGTCATCCACCACTCAACTTCTAAATTTTGCAGACTCTATTGTCACCGTAAGTCGTTCTCCAGAGTGTTCGTTTAAAATCATCGAGGTGTTTGAAACATTACGTGACCTAATTCCTGAATTAGAGTCCTTATTTTGTGATAAGGACAGTGTGTCTCTAAAGAATGAAGCAATTACCTTATGGAAAAAATCTGGGAAAGCAATTGGAGATATTTTCATGAAGTTGGAGTATTTGATTGAGCAAGACTTGACGACAGGGAGATATCTCAGCAGCAGTCTTCACCCGATTACCCAACATGTGGTGAACTACCTCCGTGTAGTTTCCCAATCACGGCAAACACTAGAGCTGGTGTTTGACGATTCCTCACTTTCTGAGAAAATTCTTAATATTATGGACATATTGGAGAGTAATTTAGAAGCAAAGGCCAAATGCTACGAGGATCCTTCTTTAGGCCATATTTTCTTGATGAATAACAACACTTATATACTTGAGATGACCAAAGATAATGAACTAGGAACCCTTTTAGGGGATGAATGGTACCGAAAACACACACTGAAAATTTCGCACTACCAGAAAACCTTGGGCACTGACGCCGGTGCTTTCCTTGATGCCGTTGACGACTTAATTGCCTCTGTCGCTGAGTGGAACCACCTCACCGGTGATAAATCCATCGCCACGTGTCTTGTTCGTGCTGAGGATATGCTTCAGCACGCTATGTTTCGTCTTGAAGATGAGTTCCGATCTCTCATGGAACGCGGTGGTGAGTCGTTTGACGTAACGCAACCGTATCGGAACAGTGATTCAGCTGGAAACTTGTCGAATTTACCGTTTGACTCGGAAGAAGAGGATGAAGAAATCGAAAACGGTGGAGAAGAAGAGGATCTGATTCCGGTTGCCATGCCGGTAACTGATTACGACATCGTGATTGATGCGTTACCGTCGGCGACGATTAACGATCTTCACGAGATCGCTAAGCGAATGGTTGCTGGTGGATTTGGTAAAGAGTGTTCTCACGTGTACAGCAGTTGTAGAAAAGAGTTCTTGGAGGAAAGTCTCTCGAGATTAGGGTTACAGAAGCTTAGCAATGAAGATGTTCACAAGATGCCATGGCAGGAAATTGAAGACGAGGTTGAAAGATGGATTAAAGCTTCAAACGTTGCTTTAAAGATACTTTTCACCAGCGAGCGACGACTCTGCGATCGGGTGTTTTTCGGATTCTCTTCAGCTGCAGATTTCTCGTTTATGGAGGTTTGCAGGGGTTCTACAGTTCAGTTGCTGAATTTTGCTGATGCTGTTGCCATTGGAAGCCGTTCGCCGGAACGGTTGTTTAAAATTCTTGATGTGTTTGAAACATTGCGTGACCTAATTCCGGAATTTGAAGTCTTATTTTGTGATCAGTATAGTGTGTCCTTAAGAAATGAAGCATTGACTATATGGAAGAGATTGGGGGAAGCAATTAGAGGTATTTTTATGGAGTTGGAGAATTTGATCCGTAGAGATCCGGCTAAGGCAGCTGTTCCGGGTGGTGGACTTCACCCGATTACCCGTTACGTGATGAACTACCTCCGTGCCGCGTGTCGGTCTAGGCTGACATTGGAGCAAGTGTTTGAAGACTATGGACATCCATTGAAGGAATACCCTAAAATTGATGATAGAATGTCATCATCTTCCTCTTTGTCAGTGCAAATGGATTGGATTATGGAGCTATTAGGGAGCAATTTGGAAGCCAAGTCGAAAATCTATAAAGATCCTGCACTGTGCTATGTTTTCTTGATGAATAACTGCAGGTACATTGTTCAAAAGGCCGAAGATAGTGAATTAGGAGCACTTTTGGGCGATGATTGGATAAAAAAACACACTGCAAAAATTCGGCAATATCATGCGCAGTATCAAAGAAGCTCATGGAATAAGGTGTTTGGGTTTTTGAAGGTTGAATACAATGGATCGATCCCACCTAGTGGGGTAGCGAAGTCTATGAAAGAGAAGCTGAAATCGTTCAACATGGTGTTCGATGATTTATGCAGGGTTCAATCTTCATGGTTTATCTTTGATGAACAACTTAAGGAAGAAATAAGAATTTCAATTGAGAAACTTTTGTTACCAGCTTATGAAAATTTCATCGGGAGGTTTCATAATATTGCTGATGTTGGTAAGCATGCTGAAAAATACATTAAGTATGAAACAGATGAGATTGAAGCAAGACTCAATGATTTGTTTCAGGGAAGCAGTGGATCAACTGGTAGCAGAAAACGAAGTTAA 2958 0.4145 MKIKLQLFILGTGFSYSLIILRSFLSSFDARVDDQYSHLQDGNSVVLCMDSLQLTNTDIASVSSSNSIDSPQLVITTDISNVMEKLGTFVKELREENLNFIEMLLNHVLDSQFVATDPNFMMDALKQETIKGLEETAKVMVSAGFEKEFSDVYNNCRMECLQECLMHRLFRLKKLSSEDVRIMPWKGLENEIKRWIRAFNVTLKILFPGERQLCDRVFSGFSSAADFSFVEICRSSTTQLLNFADSIVTVSRSPECSFKIIEVFETLRDLIPELESLFCDKDSVSLKNEAITLWKKSGKAIGDIFMKLEYLIEQDLTTGRYLSSSLHPITQHVVNYLRVVSQSRQTLELVFDDSSLSEKILNIMDILESNLEAKAKCYEDPSLGHIFLMNNNTYILEMTKDNELGTLLGDEWYRKHTLKISHYQKTLGTDAGAFLDAVDDLIASVAEWNHLTGDKSIATCLVRAEDMLQHAMFRLEDEFRSLMERGGESFDVTQPYRNSDSAGNLSNLPFDSEEEDEEIENGGEEEDLIPVAMPVTDYDIVIDALPSATINDLHEIAKRMVAGGFGKECSHVYSSCRKEFLEESLSRLGLQKLSNEDVHKMPWQEIEDEVERWIKASNVALKILFTSERRLCDRVFFGFSSAADFSFMEVCRGSTVQLLNFADAVAIGSRSPERLFKILDVFETLRDLIPEFEVLFCDQYSVSLRNEALTIWKRLGEAIRGIFMELENLIRRDPAKAAVPGGGLHPITRYVMNYLRAACRSRLTLEQVFEDYGHPLKEYPKIDDRMSSSSSLSVQMDWIMELLGSNLEAKSKIYKDPALCYVFLMNNCRYIVQKAEDSELGALLGDDWIKKHTAKIRQYHAQYQRSSWNKVFGFLKVEYNGSIPPSGVAKSMKEKLKSFNMVFDDLCRVQSSWFIFDEQLKEEIRISIEKLLLPAYENFIGRFHNIADVGKHAEKYIKYETDEIEARLNDLFQGSSGSTGSRKRS 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03833 985 FunFam Exocyst subunit Exo70 family protein 426 980 - -
Trre9g03833 985 Gene3D Exocyst complex component Exo70 72 426 - -
Trre9g03833 985 PANTHER EXOCYST COMPLEX PROTEIN EXO70 430 974 IPR004140 GO:0000145|GO:0006887
Trre9g03833 985 Gene3D Exocyst complex component Exo70 427 982 - -
Trre9g03833 985 SUPERFAMILY Cullin repeat-like 82 426 IPR016159 -
Trre9g03833 985 MobiDBLite consensus disorder prediction 492 508 - -
Trre9g03833 985 Pfam Exo70 exocyst complex subunit 611 970 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03833 985 Pfam Exo70 exocyst complex subunit 193 427 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03833 985 MobiDBLite consensus disorder prediction 490 523 - -
Trre9g03833 985 SUPERFAMILY Cullin repeat-like 430 972 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03833 Trre-Chr9 46655831 46658788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03833 429 976 EXO70 exocyst subunit family AT5G58430 68.545 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03833 K07195 - gmx:100803694 868.611