Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03831 ATGAAGCACATTATAATCCAAATTCAAAGATGGCTTATGCATTCAAATGTATGGAGAGTTGTAGGCTTCACTTCAGCTGTTGTTGGATTGGTTTGTTATGCTCTCAGCTCTTCCTTCAACCATCTATTTGGAAATTGGAATTTGTTGAAAATATTTCTTTACTGTGTTTTCTGTTTCATCATTTGTTTGCTGATTTTATTAGCAATGATAAGGAATCACTTGAGAAGTCTCAGGTTCCAAGTTCAATTCCCATTTTTTGTTTTAACCATTACCTCAGTGTATTCCTTTTTCTCTGATAAAATGATCAATGGGAAACCAGATGCATGCAGCCTCATTTCAAGTGTTGCCTTTGCTATCATGTCACTTAGTTTGTCGCGGCAAACTCAGTGTGGATTTGAAGTCGACCTTCTTTACTTTTTTCTTGGAAATCTTATTGTGCAACTCATGAAGATTAAATTGGAGTTATTCATTGTTGGAGCTGGTTTCAGCTATTCTCTTATTATTCTTCGTTCTTCCTTTCCATCCATTTCCGTAGATGAAGGATACCCTGGAATCCAAGATGAAAATTTGGCGGTTCTTCGTGTCATTTCACCTCAATTGGATTGTACTACTGATATTGCTAGTAGCATGATGGACCAATTCAGGACTTGTGTTACTGCGATTCAGAAGGAAATGTTTTATGTCATGGACATTCTTTTGGAACAGCTAAAGGAATACTTTGAAGATGCATCTGAGTTGATGTTGTCAGAATGCAGCAGTGAAGGGGTGATCATATTGGAAGCACTGTGCCCAGAAACGGTCAACAACCTTCAGGAAATAGTGAAGTTGATGGTGAACGCTGGTTTTGAGAAGGAGTGCTCCAATGTGTACAGCAGTTGTCGGAGGGAATGCTTGGAGGAGTGTCTAATAAAACAATTATTAGGTTTGGATAATCTTACTTTCGAGGAAGCTAGCATGATTTCATTTAAGGATCACAGACGCCGGATTAAAAAATGGATTAAGGCTTCCAAGGTTGCTCTCAAGATATTGTTTCCCACCGAGCGACAACTCTGCGATATTGTTTTCTTCGGGTTCTCTGCCATATCCGATCTCACTTTTACAGATGTTTGCAGGGAATGTGCCATTTATTTGCTGAATCTTCCCAATGCGTTAGCGAATGAAAGTCATTCACCGGTGCAGATGTTTAGAATGCTCAACGTGTTTGAAACATTGGGCAACCTAATTCCGAATTTCGAGTCTCTTTTTTGTGATCAATATAGTGCGTCACTAACTAATGAAGCAAACACAGTTTTGAAGAAATTGGGAGAAGCAATAGTGTTTATTTTCACGGAGTTGGAAAATATGATTCGCCAAGATCCGACGAATGCACCAGTTCGTGGTGGCGGGCTTCACCCCATTGTTCGTTACATGATGAATTACCTAACCACCACATATTACTATCATCAGACACTGGAGCAGGTATTTGAAGACCATGGACATATGTTGCAGGAATACCTCAAGCTTGATGATAATGTGCCCTCCTCTTCCGCTATTTCCCTGCAGATGGAACGGATTATGGAGGTATTGGAGACTAATTTGGAAGCAAAGTCCAAAATTTATAAAGACCCTGCATTGTGCTGTGTTTTCTTAAAGAATAGCAGCAGATACATAATTCGGAAGACGGAAGGTAGTGTCTTAAGGGCTCTTTTTGCGAATGGCTTGTTTGAAAGATACCAAGCAAAGTTACAGCACAACTATGAGCAATATCTGAGAATCTCATGGAATAAGGTGCAAGGGTTTCTAAACCTGGACAACAATGGATTAGTGCTTCCTGATATGGTAGAGAAGTCAATGAAGGAGAAGCTAGAATCTTTCAACATACTGTTTGAGGAAATATGCAGGGTTCAATCTTTGTGGTTTGTCTTGGATAAAGAGTTTAGGGAAGAAATAATAACTTCCATTGGGGAAATGTTGTTGCCAGCCTATGGAAACTTCATTCAGAGGTTCCAGAGTGTTCTGGAACTTGGAAAGCATGCTGATAAATATACTATTAAGTATGGATTGGAGGATATTGAAGCAAGACTCAACAATTTGTTCCAGAGAATCATTCGATAA 2094 0.3926 MKHIIIQIQRWLMHSNVWRVVGFTSAVVGLVCYALSSSFNHLFGNWNLLKIFLYCVFCFIICLLILLAMIRNHLRSLRFQVQFPFFVLTITSVYSFFSDKMINGKPDACSLISSVAFAIMSLSLSRQTQCGFEVDLLYFFLGNLIVQLMKIKLELFIVGAGFSYSLIILRSSFPSISVDEGYPGIQDENLAVLRVISPQLDCTTDIASSMMDQFRTCVTAIQKEMFYVMDILLEQLKEYFEDASELMLSECSSEGVIILEALCPETVNNLQEIVKLMVNAGFEKECSNVYSSCRRECLEECLIKQLLGLDNLTFEEASMISFKDHRRRIKKWIKASKVALKILFPTERQLCDIVFFGFSAISDLTFTDVCRECAIYLLNLPNALANESHSPVQMFRMLNVFETLGNLIPNFESLFCDQYSASLTNEANTVLKKLGEAIVFIFTELENMIRQDPTNAPVRGGGLHPIVRYMMNYLTTTYYYHQTLEQVFEDHGHMLQEYLKLDDNVPSSSAISLQMERIMEVLETNLEAKSKIYKDPALCCVFLKNSSRYIIRKTEGSVLRALFANGLFERYQAKLQHNYEQYLRISWNKVQGFLNLDNNGLVLPDMVEKSMKEKLESFNILFEEICRVQSLWFVLDKEFREEIITSIGEMLLPAYGNFIQRFQSVLELGKHADKYTIKYGLEDIEARLNNLFQRIIR 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03831 697 SUPERFAMILY Cullin repeat-like 212 692 IPR016159 -
Trre9g03831 697 Pfam Exo70 exocyst complex subunit 330 689 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre9g03831 697 Gene3D Exocyst complex component Exo70 199 695 - -
Trre9g03831 697 Coils Coil 681 697 - -
Trre9g03831 697 PANTHER EXOCYST COMPLEX PROTEIN EXO70 225 693 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03831 Trre-Chr9 46644084 46646177 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03831 257 693 EXO70 exocyst subunit family AT5G58430 50.797 1.46e-146 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03831 - - psat:127118479 918.302