Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03829 ATGTCTGAAAACGGAGAAGAGAAATTACTCGCTGTGGCACGCCACATAGCAAAAACGCTAGGCCACAACAATAACATGGCTGATGATATTCTTCAAATTTTCTCAAACTTCGATGGAAGATTCTCGAAGGAAAATCTCTCTGAGAAAGTAGCAGTCACAGATACAGATCCAAGAGCATGCGCCGCACTGGATCAGTGTCTCAAAAACCTCGACCGTCGGATCTCTCACTTTGTTTCCTCCGATCACCCTATCTGGGCGGATTCCGCCGACGCCGGTGCTTTCCTTGACGCCGTTGACGACTTAATCGCCTCCGTCGCTGAGTGGAACCACCTCACCGGTGATAAATCCATCGCCACGTGTCTTGTTCGTGCTGAGGATATGCTTCAGCATGCTATGTTTCGTCTTGAAGATGAGTTCCGATCTCTCATGGAACGCGGTGGCGAGTCGTTTGACGTAACGCAACCGTATCGGAACAGTGATTCAGCTGGAAACTTGTCGAATTTACCGTTTGACTCGGAAGAAGAGGATGAAGAAATCGAAAACGGTGGAGAAGAAGAGGATCTGATTCCGGTCGCGATGCCGGTAACTGATTACGACATCGTGATTGATGCGTTACCGTCGGCGACGATTAACGATCTTCATGAGATTGCTAAGCGAATGGTTGCTGGTGGATTTGGTAAAGAGTGTTCTCATGTCTACAGCAGTTGTAGAAGAGAGTTCTTGGAGGAAAGTCTATCGAGATTAGGGTTACAGAAGCTTAGCAATGAAGATGTTCACAAGATGCCATGGCAGGAAATTGAAGACGAGATTGAAAGATGGATTAAAGCTTCCAATGTTGCTTTAAAGATACTTTTCACCAGCGAGCGACGACTCTGCGATCGGGTGTTTTTCGGATTCTCTTCAGCTGCAGATTTCTCGTTTATGGAGGTTTGCAGAGGTTCTACAGTTCAGTTGCTGAATTTTGCTGATGCTGTTGCCATCGGAAGCCGTTCGCCAGAACGGTTGTTTAAAATTCTCGATGTGTTTGAAACATTGCGTGACCTAATTCCGGAATTCGAGGTCTTATTTTGTGATCAGTATAGTGTGTCTTTAAGGAATGAAGCATTGACTATATGGAAGAGATTGGGGGAAGCAATTAGAGGTATTTTTATGGAGTTGGAGAATTTGATCCGTAGAGATCCGGCTAAGGCGGCTGTTCCCGGTGGTGGACTTCACCCGATTACCCGTTACGTGATGAACTACCTCCGTGCAGCGTGTCGGTCTAGGCTGACATTGGAGCAAGTGTTTGAAGACTATGGACATCCATTGAAGGAATACCCTAAAATTGATGATAGAATGTCTTCATCTTCCTCTCTATCAGTGCAAATGGATTGGATTATGGAGCTATTAGAGAGCAATTTGGAAGCCAAGTCGAAAATCTATAAAGACCCTGCATTGTGTTATGTTTTCTTGATGAATAACTGCAGGTACATTGTTCAAAAGGCCGAAGATAGTGAATTAGGAGCACTTTTAGGTGATGATTGGATCAAAAAACACACTGCAAAAATTCGGCAATATCATGCGCAGTATCAAAGAAGCTCATGGAATAAGGTGTTTGGGTTTCTGAAAGTTGAATACAATGGATCAATCCCACCTAGTGGGGTAGCCAAGTCTATGAAAGAGAAGCTGAAATCGTTCAACATGGTGTTCGATGATTTATGCAGGGTTCAATCTTCATGGTTTATCTTTGATGAACAACTTAAGGAAGAAATAAGAATTTCAATTGAGAAACTTTTGTTACCAGCTTATGAAAATTTCATTGGGAGGTTTCATAATATTGCTGATGTTGGTAAGCATGCTGAAAAATACATTAAGTATGAAACAGAGGAGATCGAAGCAAGACTCAATGATTTGTTTCAGGGAAGCAGTGGATCAACTGGTAGCAGAAAACGAAGTTAA 1938 0.4329 MSENGEEKLLAVARHIAKTLGHNNNMADDILQIFSNFDGRFSKENLSEKVAVTDTDPRACAALDQCLKNLDRRISHFVSSDHPIWADSADAGAFLDAVDDLIASVAEWNHLTGDKSIATCLVRAEDMLQHAMFRLEDEFRSLMERGGESFDVTQPYRNSDSAGNLSNLPFDSEEEDEEIENGGEEEDLIPVAMPVTDYDIVIDALPSATINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESLSRLGLQKLSNEDVHKMPWQEIEDEIERWIKASNVALKILFTSERRLCDRVFFGFSSAADFSFMEVCRGSTVQLLNFADAVAIGSRSPERLFKILDVFETLRDLIPEFEVLFCDQYSVSLRNEALTIWKRLGEAIRGIFMELENLIRRDPAKAAVPGGGLHPITRYVMNYLRAACRSRLTLEQVFEDYGHPLKEYPKIDDRMSSSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNCRYIVQKAEDSELGALLGDDWIKKHTAKIRQYHAQYQRSSWNKVFGFLKVEYNGSIPPSGVAKSMKEKLKSFNMVFDDLCRVQSSWFIFDEQLKEEIRISIEKLLLPAYENFIGRFHNIADVGKHAEKYIKYETEEIEARLNDLFQGSSGSTGSRKRS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03829 645 SUPERFAMILY Cullin repeat-like 85 632 IPR016159 -
Trre9g03829 645 FunFam Exocyst subunit Exo70 family protein 78 640 - -
Trre9g03829 645 Gene3D Exocyst complex component Exo70 84 642 - -
Trre9g03829 645 MobiDBLite consensus disorder prediction 152 168 - -
Trre9g03829 645 MobiDBLite consensus disorder prediction 150 183 - -
Trre9g03829 645 PANTHER EXOCYST COMPLEX PROTEIN EXO70 64 634 IPR004140 GO:0000145|GO:0006887
Trre9g03829 645 Pfam Exo70 exocyst complex subunit 271 630 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03829 Trre-Chr9 46639728 46641665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03829 1 636 EXO70 exocyst subunit family AT5G58430 68.966 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03829 K07195 - gmx:100803694 1004.2