Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03804 ATGTCACCCCTTGTAATTCTTTTACCTTTAGCTCTCTTTCTATTCTTCTTCTACAAAAAACACAAAACATCTAAGAAACAAACTCTTCCACCAGGTCCTAAAGGCCTTCCTTTCATTGGAAACTTACACCAAATTGATAGTTCATCTCTTGGTTTAAGCTTCTATGAACTCTCAAAGAAATATGGTTCTTTAACCTTCCTTAAACTTGGTTCAAGACAAACACTTGTTGTTTCCTCAGCTAACATGGCCAAACAAGTAATGAAAACGCACGATATCGATTTTTGTAACCGACCGGCTTTAACGAGCCATATGAAATTCTCATATGATGGATTAGATCAAGCATTTTCACCATATAGAGAATATTGGAGACATACCAAGAAATTTTCTTTCATCCATTTTTTAAGTGTCAAAAGAGTCTCAATGTATGCCCCGGTTAGAAAATACGAGGTATCTCAAATGATCAAGAGGATATCGGAACAATATGCTTCTTCCAACAAACCTGTGAACCTACATGAGCTTCTCATGGGTCTTACAAGCGCGATAGTTTGTAAGACTGCGTTCGGTAGAAGGTTCGAAGATGAAGGAACCGAGCGTAGCATGTTTCATGATTTGCTTAAAGAAGCGCAAGAATTGACAGTTTCGTTCTTTTACACGGATTATTTGCCTTTTGTTGGAGGGATTGTTGATAAGTTCAGTGGAATAATGAGTCGTCTCGAGAATTTGTTCAAGATTTTAGATGGATTTTTTCAAAATATTGTTGATGAACATCTTGATCCTGAAAGGAAGCAGTTGCCTCCACAAGAAGATGTAATTGATGCCTTGATTGGATTGAAGAATGATCCTTACTGGTCAATGGATCTCAAATCTGAGCACATCAAACCCTTGATCATGAATATGGTGTTGGCAGGGACAGACACAATTTCTGCAGCAGTAGTTTGGGCTATGACTGCACTAATGCAGAATCCAAGAGTGATGCAAAAAGTACAGCAAGAGATTCGAAAAGTGTATGAAGGAAAGAGTTTTGTAGAGGAGGAAGATGTCGAAAAGCTTCCATATCTCAAGGCAGTTATAAAAGAAACAATGAGATTGTATCCATCACTGCCCATACTTTTTCCAAGAGAAACGATGAAAAAGTGTGAAATTGAAGGGTACGATATTCCAGAGAAGACACTGGTGTTCGTGAATGCTTGGGCAATCCATAGAGACCCAGAAGCATATGAGAATCCAGAAGAGTTTTATCCAGAGAGATTCGTAGGCAGTGATATAGATTTAAAAGGACAAGATTTTGAGCTAGTTCCATTTGGTTCCGGGCGAAGAGTTTGCCCCGGCTTGAACATGGCTGTTGCTACCGTGGACTTAGTACTAGCTAATCTTCTCTATTTGTTCGATTGGGAAATGCCTGAAGGAGTAAAGAGGGAAGATATAGACATTGAAGGTCTTCCGGGACTTATTCAACACAAGAAAAATCCTCTTTGCCTTGTTCCTAAGAAGCGAATTGAATGTGCGTGA 1509 0.3903 MSPLVILLPLALFLFFFYKKHKTSKKQTLPPGPKGLPFIGNLHQIDSSSLGLSFYELSKKYGSLTFLKLGSRQTLVVSSANMAKQVMKTHDIDFCNRPALTSHMKFSYDGLDQAFSPYREYWRHTKKFSFIHFLSVKRVSMYAPVRKYEVSQMIKRISEQYASSNKPVNLHELLMGLTSAIVCKTAFGRRFEDEGTERSMFHDLLKEAQELTVSFFYTDYLPFVGGIVDKFSGIMSRLENLFKILDGFFQNIVDEHLDPERKQLPPQEDVIDALIGLKNDPYWSMDLKSEHIKPLIMNMVLAGTDTISAAVVWAMTALMQNPRVMQKVQQEIRKVYEGKSFVEEEDVEKLPYLKAVIKETMRLYPSLPILFPRETMKKCEIEGYDIPEKTLVFVNAWAIHRDPEAYENPEEFYPERFVGSDIDLKGQDFELVPFGSGRRVCPGLNMAVATVDLVLANLLYLFDWEMPEGVKREDIDIEGLPGLIQHKKNPLCLVPKKRIECA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03804 502 CDD CYP71-like 60 491 - -
Trre9g03804 502 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Trre9g03804 502 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 Pfam Cytochrome P450 30 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 Gene3D Cytochrome P450 22 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 FunFam Cytochrome P450 83B1 16 494 - -
Trre9g03804 502 PANTHER CYTOCHROME P450 71B11-RELATED 15 496 - -
Trre9g03804 502 SUPERFAMILY Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03804 502 Coils Coil 494 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03804 Trre-Chr9 46450584 46453210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03804 1 499 Cytochrome P450 AT4G31500 44.444 4.80e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03804 - - gmx:100798287 719.539