Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03796 ATGTCGAAGCTAGTTTGCGTCACCGGCGGCAGCGGATGCATCGGTTCATGGCTAGTCCATCTCCTTCTCCTCCGCGGCTACACTGTTCACGCCACCGTCCAAAATCTCAATGATGAGAACGAAACGAAGCATCTAGAAGCTCTCGAAGGAGCACAAACTAATCTCCGTCTCTTCCAGATCGATCTCCTTAACTACGACACAATCCTCGCTGCTGTCCGCGGTTGCGTCGGAATTTTCCACCTCGCTTCACCTTGCATTGTAGACAAAGTTCATGATCCTCAGAAGGAGCTTTTGGATCCTGCAATTAAAGGGACTTTGAATGTGCTTACTGCAGCTAAGGAAGTAGGAGTGAAGCGTGTGGTTGTTACTTCGTCTATCTCCGCGATTACGCCTAGTCCTGATTGGCCTTCTGATGTTGTTAAAAGAGAGGATTGTTGGACTGATGTTGAATATTGCAAGAAAAAAGAGTTGTGGTATCCGTTGTCCAAAACATTGGCTGAGAAAGCTGCGTGGGATTTTTCCAAAGAAAATGGTTTGGATGTTGTTGTGGTGAATCCTGGTACTGTGATGGGTCCTGTTATTCCACCAAGGCTTAATGCAAGCATGCTCATGCTTGTAAGACTTCTTGAAGGCTGCGCTGAAACATTTGAAGACTATTTTATGGGATTGGTCCACTTCAAAGATGTAGCATTGGCGCATATTTTGGTGTATGAGAACAAAGAAGCATCTGGTAGACATTTGTGTGTTGAAACTATCTCTCACTACGGTGATTTTGTAGCAAAAGTTGCTGAACTTTATCCAGAATATAATGTTCCTAGGATGGAGCGAGATACGCAACCTGGATTGTTGAGAGCGAATGATGGATCAAAGAAGCTCATAGATTTGGGTTTGGAATTCACTCCAATGGAGCAAATTGTCAAGGATGCTGTAGAGAGTTTGAAGAACAAAGGATTCATTTCTTGA 963 0.4424 MSKLVCVTGGSGCIGSWLVHLLLLRGYTVHATVQNLNDENETKHLEALEGAQTNLRLFQIDLLNYDTILAAVRGCVGIFHLASPCIVDKVHDPQKELLDPAIKGTLNVLTAAKEVGVKRVVVTSSISAITPSPDWPSDVVKREDCWTDVEYCKKKELWYPLSKTLAEKAAWDFSKENGLDVVVVNPGTVMGPVIPPRLNASMLMLVRLLEGCAETFEDYFMGLVHFKDVALAHILVYENKEASGRHLCVETISHYGDFVAKVAELYPEYNVPRMERDTQPGLLRANDGSKKLIDLGLEFTPMEQIVKDAVESLKNKGFIS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03796 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 310 - -
Trre9g03796 320 Pfam NAD dependent epimerase/dehydratase family 5 242 IPR001509 -
Trre9g03796 320 CDD FR_SDR_e 5 297 - -
Trre9g03796 320 FunFam Cinnamoyl-CoA reductase 1 1 320 - -
Trre9g03796 320 Gene3D - 1 320 - -
Trre9g03796 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 314 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03796 Trre-Chr9 46417886 46420708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03796 3 320 Monolignol Biosynthesis Gene Families AT5G58490 75.472 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03796 - - gmx:100803241 570.852