Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03795 ATGGGAAAGTTTTGGTTTATTGGGATTTTCATTGTTGCAACCTATGTCTGTAATTTTCTAGGAACAACAACAACAACTATTAGGGTAGTAGAAGGGTACCCAATTGAGGATCTGGTTGTTAGTTTACCAGGACAACCTAAAGTTGAATTCAGTCAATATGCTGGCTATATTGATATTGATGTAAAACATGGTAGAAGTCTTTTTTATTATTTTGTTGAGGCTGACCATCAACCTCACAAAAAACCACTCACCCTTTGGCTCAATGGAGGTCCGGGATGTTCATCCATTGGAGGAGGTGCTTTTACTGAATTGGGTCCGTTTTTTCCTAATGGCGATGGACGTGGTTTACGAAAAAATTCAATGTCTTGGAACAGAGCTTCCAATCTCCTCTTTGTGGAGTCTCCTGCTGGTGTTGGTTGGTCATACTCAAATACAGCTTCTGATTATAACATCGGTGATGCCTCCACAGCCAATGATATGCTTTTGTTCTTCCTGAAATGGTACGAGAAGTTTCCTACCTACAGATCAAGAGACTTGTTTCTTACCGGAGAAAGCTATGCAGGACATTACATACCTCAGTTAGCTAATGCTATTCTTGATTATAACGCTCATTCAACCGGTTACAAATTCAAATTGAAGGGAGTTGCTATTGGAAACCCTCTTCTGAATCTCGACCGTGATGCCCAAGCAACATATGACTACTTCTGGTCACACGGAATGATTTCGGATGAAATTGGCCTTGCCATTACGAAGGATTGCGATTTTGATGATTATACTTTTGCATCTCCTCATAATGTATCCGAGTCATGCAACAACGCCATCAGTGATGCTAATAAAATTGTTGGCGATTATATAAACAACTATGATGTGATTCTCGATGTCTGTTATCCATCCATTGTTCAACAAGAATTGAGATTGAAAAAGATGGCTACTAAAATAAGTGTAGGCGTAGATGTCTGTATGAGTTATGAAAGACGTTTTTACTTCAACCTCCCTGAGGTTCAAAAGGCGCTTCATGCAAACCGTACCAATTTGCCGTATCCATGGTCCATGTGCAGCGGTGTTTTAAATTACAGTGATACCGATCCTAATATTAATATGCTTCCAATTCTCAAACGGATTGTTCAAAACCATATTCCAGTATGGGTTTTCAGTGGAGACCAAGATTCTGTTGTGCCATTACTAGGTTCTCGAACACTCATCCGTGAACTAGCGCACGACCTGAAGTTCAAGATTACAGTCCCATATGGTGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACTGAGTATGGAAATTTGTTAACTTTCGCCACCGTAAGAGGAGCAGCGCACATGGTACCATATGCACAACCTTCAAGAGCACTGCATCTATTCAGTTCCTTTGTGAACGGTAGGAGATTGCCGAACACAACTCGACCTTCAATAGGTGGATGA 1440 0.4104 MGKFWFIGIFIVATYVCNFLGTTTTTIRVVEGYPIEDLVVSLPGQPKVEFSQYAGYIDIDVKHGRSLFYYFVEADHQPHKKPLTLWLNGGPGCSSIGGGAFTELGPFFPNGDGRGLRKNSMSWNRASNLLFVESPAGVGWSYSNTASDYNIGDASTANDMLLFFLKWYEKFPTYRSRDLFLTGESYAGHYIPQLANAILDYNAHSTGYKFKLKGVAIGNPLLNLDRDAQATYDYFWSHGMISDEIGLAITKDCDFDDYTFASPHNVSESCNNAISDANKIVGDYINNYDVILDVCYPSIVQQELRLKKMATKISVGVDVCMSYERRFYFNLPEVQKALHANRTNLPYPWSMCSGVLNYSDTDPNINMLPILKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHDLKFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVNGRRLPNTTRPSIGG 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03795 479 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Trre9g03795 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Trre9g03795 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Trre9g03795 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Trre9g03795 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Trre9g03795 479 FunFam Carboxypeptidase 33 297 - -
Trre9g03795 479 SUPERFAMILY alpha/beta-Hydrolases 30 473 IPR029058 -
Trre9g03795 479 Gene3D - 320 356 - -
Trre9g03795 479 Gene3D alpha/beta hydrolase 35 296 IPR029058 -
Trre9g03795 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 453 IPR001563 GO:0004185|GO:0006508
Trre9g03795 479 Gene3D - 367 466 - -
Trre9g03795 479 FunFam Carboxypeptidase 367 466 - -
Trre9g03795 479 Pfam Serine carboxypeptidase 44 466 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03795 Trre-Chr9 46406663 46410249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03795 326 469 Calmodulin-binding Proteins AT2G22960 25.694 4.16e-11 60.1