Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03758 ATGGCCGAGGCTTTACTTCGAGTTGTGTTTCAAAATTTGATGTCTCTGCTTCAAAATGAATTGTCCACCATGTTTGGAATCAGGTCAAAGGCTGAAAAGCTATCAACCACCTTGAATCTGATCAAGGCTGTTCTTGAAGATGCTGAGAAGAAACAACTCACTGACCGCTCTATTAAGGAATGGCTACAACAACTCAAAGATGCTGTATATGTGCTCGATGATATCCTTGATGAGTGTTCCATTAAATCCAATCGACTTAAGGGCTCATCCTCTTTCAAACCAAAGAATATCATTTTCCGCCATAACATTGGAAACAAGTTGAAAGAAATTACAGGCAGATTTGATGAAATTGCAGAGAGGAAGAAAAAGTTTCTTCTACAAGAGGGTGTTACTGCTAAGGAAATGACAGTTGAAGTGGCTGAATGGCGTCAAACTTGCTCAATTATTGCTGAACCCAAAGTGTACGGACGAGAAGATGATAAAGAGAAAATTGTCGAGTTTCTTATCAACCAAGCAGGGGACTCTAAAACTCTCTCTGTCTATCCCATTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTCGCTCAATTGGTCTACAATGATCAAAGGGTGGGTACCACCAATTTTTATACAAAGATATGGGTTTGTGTATCTGAAGTTTTCTCGGTCAAGAGGATTCTATGTTCCATTATTGAATCTATCAAAAGTGAGAAATGTGATGCCTTGGATTTAGATGTAATACAAAGAAAGGTGCAAGAACTATTGCAAGGTAAAAGATTTTTGCTAGTTTTAGATGACGTTTGGAACAAAAACGAAGAACTGAAATTTGGATTGAGCCAAGAGAAATGGAATCAGTTGAAATCAGTGTTGTCGAGTGGATCCAAAGGTAGTTCTTGTTTGGTTTCTACCCGTGATGAGGTTGTTGCATCAATCATGGGAACATGTCAAGCTCATCATTTGTTTGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGATATGATACAGAAGAACAAGTAGAGCTTGTGGAAATAGGCAAGGAGATAGCAAAAAAGTGTGGGGGATTGCCGCTTGCTGCACAAGCACTGGGAGGTCTAATGCACTCACGGAATGGAGAAAAAGAATGGCTTGAAATTAAAAACAGCGGACTTTGGGATTTACCGAGTGACAATTCTATTTTTTCAGCCTTGAGATTGAGCTATTCTTATTTAACACCGACCTTAAAGCAATGTTTTGTTTTTTGTGCTATATTTCCCAAGGATACAATAATGTTGAAGGAAGAATTGATTCATCTTTGGATGGCTCATGGATTTATTTCATCTAGAAAAAAATTGGACGTTGAAGATGTTGGCAACATGGTTTGGAATGAACTATGCCAAAAATCATTCTTTCAAGACATTAAGATGGATGAAGATTCTGGTGATATTTCTTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAATAACGGGGCAAGAATGTTTGTGTTTGGAGGATGCAAACATGACAAGTTTGTCAAAAAGCACACACCACATAAGTGTTCACTCCGATGACTTGTTATCAATGGATGAGGGTGCCTTCAAAAAAGTTGAATCCTTGCGAACATATTTTCAGCTGAACGGATATTCTGAAGAAAATCATCATTACTTCCCAACAAACCGTTTTCTCCGGGTTTTATGCACATCTTTTATCCATATACCATCACTAGGGAGTTTAATTCATTTAAGTTTAGAGACATGTAATAGTTTGGCAGAATTACATGATCTAAACCTTGGTGGAAAACTGAGTATCGAAGGCTTGAATAATGTTGGCAGTTCATCTGAAGCTGAAGAAGCCAATTTGATGCGTAAAAAAGACCTCCAAGAATTATGCTTGTCATGGAAAAGTAGAAGTGATGAATCTACAAAGACCCCTGCTATTAACGTTGATCAAGTACTTGAAGTGCTTCAACCTCATTCAAATCTCAAGAGGTTGAAAATAGATTACTATGAAGGATTAGTGTTACCAAGTTGGATAAGTACTCTTAGTAATTTACTTTCACTTCACCTTGAGGATTGTGAGAAATGTGTGCGGCTACCGTCATTGTGTAAACTAGAATATCTAAAAAGATTGGAATTGGTGAGGATGGGTAATCTGACATACTTGGATGATGATGAGTCTCACGATGGTATGGAGGTGAGGATGTTTCCATCTCTTGAGGTACTTGTGTTAAAAATGTTACCAAACATAGAGGGGTTATTGAAAGTGGAAAGAGGGGAGATGTTTCCTTGTCTTTCTAAATTGATAATCTACTCTTGCCCCAAACTTGGACTGCCATGTTTTCCATCTCTTAAACACCTCCGTGTGTTTGGATGTAACACTGAGTTACTGAGGTCAATCTCTACCTTTTGCGGTCTGACCTACCTTAACCTATGTGGCGGTGAAGGAATAACATCCTTCCCAGAGGGGATGTTCACAAACCTTACTTTTCTTCAAACTCTGTCTATGGATAATTTCCCAAAATTGAAGGAGTTACCAAATGAACCCTTTAACCTAACTTTGGAGCATCTGTCGATCTCTAACTGTAATGAGCTTGAGTCTTTACCAGAGCAAATTTGGGAAAGTCTCAAATCCCTTAGATATCTACAGATTGGTAATTGTAAAGGATTTCGATGGTTGCCGGAGGGTATTCAACACCTCAGTTCTCTTGAGAGTCTGATAATTACTGGATGCCCAACACTAGTGGAACGGTGCAAGGAGGGAACTGGGGAGGACTGGGACAAGATAGCACATATTCCGGAATTAAAGATTGGGTTGACAACGGTGTTCATCTTCTAA 2838 0.3876 MAEALLRVVFQNLMSLLQNELSTMFGIRSKAEKLSTTLNLIKAVLEDAEKKQLTDRSIKEWLQQLKDAVYVLDDILDECSIKSNRLKGSSSFKPKNIIFRHNIGNKLKEITGRFDEIAERKKKFLLQEGVTAKEMTVEVAEWRQTCSIIAEPKVYGREDDKEKIVEFLINQAGDSKTLSVYPIVGLGGVGKTTLAQLVYNDQRVGTTNFYTKIWVCVSEVFSVKRILCSIIESIKSEKCDALDLDVIQRKVQELLQGKRFLLVLDDVWNKNEELKFGLSQEKWNQLKSVLSSGSKGSSCLVSTRDEVVASIMGTCQAHHLFGLSENECWLLFKQYAFGYDTEEQVELVEIGKEIAKKCGGLPLAAQALGGLMHSRNGEKEWLEIKNSGLWDLPSDNSIFSALRLSYSYLTPTLKQCFVFCAIFPKDTIMLKEELIHLWMAHGFISSRKKLDVEDVGNMVWNELCQKSFFQDIKMDEDSGDISFKMHDLVHDLAQSITGQECLCLEDANMTSLSKSTHHISVHSDDLLSMDEGAFKKVESLRTYFQLNGYSEENHHYFPTNRFLRVLCTSFIHIPSLGSLIHLSLETCNSLAELHDLNLGGKLSIEGLNNVGSSSEAEEANLMRKKDLQELCLSWKSRSDESTKTPAINVDQVLEVLQPHSNLKRLKIDYYEGLVLPSWISTLSNLLSLHLEDCEKCVRLPSLCKLEYLKRLELVRMGNLTYLDDDESHDGMEVRMFPSLEVLVLKMLPNIEGLLKVERGEMFPCLSKLIIYSCPKLGLPCFPSLKHLRVFGCNTELLRSISTFCGLTYLNLCGGEGITSFPEGMFTNLTFLQTLSMDNFPKLKELPNEPFNLTLEHLSISNCNELESLPEQIWESLKSLRYLQIGNCKGFRWLPEGIQHLSSLESLIITGCPTLVERCKEGTGEDWDKIAHIPELKIGLTTVFIF 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03758 945 Pfam NB-ARC domain 157 386 IPR002182 GO:0043531
Trre9g03758 945 Gene3D - 138 317 IPR027417 -
Trre9g03758 945 Gene3D - 322 410 IPR042197 -
Trre9g03758 945 PANTHER DISEASE RESISTANCE PROTEIN RP 33 773 IPR044974 GO:0006952
Trre9g03758 945 CDD RX-CC_like 2 119 IPR038005 -
Trre9g03758 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 420 IPR027417 -
Trre9g03758 945 Gene3D - 6 122 - -
Trre9g03758 945 Gene3D Ribonuclease Inhibitor 560 779 IPR032675 -
Trre9g03758 945 SUPERFAMILY L domain-like 733 914 - -
Trre9g03758 945 PRINTS Disease resistance protein signature 180 195 - -
Trre9g03758 945 PRINTS Disease resistance protein signature 898 914 - -
Trre9g03758 945 PRINTS Disease resistance protein signature 358 372 - -
Trre9g03758 945 PRINTS Disease resistance protein signature 254 268 - -
Trre9g03758 945 Coils Coil 31 51 - -
Trre9g03758 945 SUPERFAMILY L domain-like 484 789 - -
Trre9g03758 945 Pfam Rx N-terminal domain 6 100 IPR041118 -
Trre9g03758 945 Gene3D Ribonuclease Inhibitor 780 922 IPR032675 -
Trre9g03758 945 FunFam Probable disease resistance protein At1g63360 406 495 - -
Trre9g03758 945 Gene3D - 412 495 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03758 Trre-Chr9 46052113 46055187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03758 165 500 WRKY Transcription Factor Family AT5G45050 26.036 1.95e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03758 - - mtr:11405813 908.672