Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03757 ATGGCTGATGCTTTACTTGGAGTTGCGTTTGAAAATTTGATATCTCTGCTTCAAAACGAATTTTCAACCATTTTTGGAATCAGGTCAAAGGCTCAAAAACTATCAACCACCTTGGAACTGATCAAGGTTGTTCTGCAAGATGCTGAGAAGAAACAACTCACAGACCGCTCTATTAAGGTATGGCTCCAACAACTCAAAGATGCTGCATATGTGCTAGATGATATTCTTGATGAGTGTTCCATTAAATCCTATCGACTTAAGGGCTCATCCGCTTTCAAACCAAAGAATATCATTTTCCGCCATAACATTGGAAAACGGTTGAAAGAAATTACAAGCAGATTCGATGAAATTGCTGACAGGAAGAACAAGTTTCTTCTACAAAAGAGTGTTACAGCTAAGGAAATGACAGTTGAAGTGGCTGAATGGCGTCAAACCTGGTCAATTATTGCTGAACCAAAAGTATACGGAAGAGAAGATGATAAACAGAAGATCGTCGAGCATCTTCTCAACCAAGCGAGGGACTCTAGCTCTGTTTCCGTCTATCCCATTGTCGGCTTAGGTGGTGTTGGAAAAACAACTCTTGCTCAATTGGTCTACAATGATCAAAGGGTGAGTAGCAAATTTCAGACAAAAATTTGGGTTTGTGTTTCTGAAGATTTCTCAGTCAAGAGGATTCTATGTTCCATTATAGAATCAATCAATAATGAGAAGTGTGACGCCTTAGATTTAGATGTAATACAAAGAAAGGTGCAAGAATTGTTGCAAGGTAAAAGACTTTTGCTAGTTTTAGATGATATGTGGAATAAAAATGAAGAACTGGAATTAGGATTGACCCAAGAGAAATGGAACAAGTTGAAAGCAGTGTTGTCTGGTGGATCCAAAGGTAGTTGTTGTCTAGTTTCCACTCGTGATGAGGTTGTCGCATCAATCACGGGAACATGTCAAGCTCATCATTTGTCAGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGAATTGACAGAGAAGAACAAGTAGAGCTTGTGGTAATAGGCAAGGAGATAGCAAAAAAGTGTGGGGGATTGCCGCTTGCTGCACGAGCATTGGGAGGTCTAATGCACTCACGGAATGGAGAAAAAGAATGGCTTGAAATTAAAGAAAGCGGACTTTGGGATTTACCGAGTGACAATTCTATTTTTCCAGCCATGAGGTTGAGCTATTCTTATTTAACACCGACCTTAAAGCAATGTTTTGCTTTTTGTGCTATATTTCCCAAAGACACAGAAATGTTGAAGGAAGAATTGATTCATCTTTGGATGGCTCATGGATTTATTTCATCTAGGAAAAATTTGGAGGTTGAAGATGTTGGCAACATGGTTTGGAATGAATTGTGCCAAAAATCATTCTTTCAAGACATTAAGACGAAGGAATATTATTCTGGACACATTTCTTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAATAATAGGGCAAGAATGTTTGTATTTGGAGGATGCAAACATGACTAGTTTGTCAAAAAGCACACACCATGTAAGTGTTGACTCCAAATACTTGTTAACTATCGGTGAGGGTGCCTTCAAAAAAGTTGATTCGTTGAGAACATTTGTTCAGTTGGACCGATATACCGGAAATGATCATCATTACTTCTTCCCAACAAACTGTTTTCTTCGGGTTTTATGCACATCCTTTATCCACAGACCATCAGTATGGAGTTTAATTCATTTAAGTTTAGAGAAAGGCAATAGTTTGGCAGAATTACATGATCTAAACCTTGGTGGAAAACTGAGTATCAAAGGCTTAAAGGATGTTGGCAGTTTATCCGAAGCTCAAGAGGCCAATTTGATGGGTAAAAAAGACCTCCAAGAATTGTGCTTGTCATGGAAAAGAAGAAGTGATGAATTTACGGAGCCCCCTACTATTAATGGTGAGCAAGTACTTGAAGTGCTTCAACCTCACTCAAATCTCAAGAGATTTGAAATAGATTACTATGAAGGATTATTGTTACCAAGTTGGATAAGTTATCTTAGTAATTTAGTTGAACTTCAACTTACGGATTGCAAGAATTGTGTGCGGCTACCGTCATTTGGTAAACTACAATCTCTAAAAAGATTGTATTTATACTATATGTATAATCTAAAATATTTGGATGATGAATGTCACGATGGTATGGATGTGAGGATTTTCCCATCTCTGGAGGTACTCGAGTTATGTCGGTTACAAAACATAGAGGGGTTATTGAAAGTGGAAAGAGGGGAGATGTTTCCTTGTCTTTCTCGTTTGGTGATCGAGTCTTGCCCTAAACTTGGACTGCCATGTCTTCCATCTCTTAAAGACCTCAATGTCAGAGGATTTAACAATGAATTACTGAGGTCAATCTCTACCTTCTGCACTCTTACCACTCTCTTCCTTTATGAAGGCGATAAAGGAATAATAACATCCTTCCCAGAGGGGATGTTCACAAACCTTACTTTTCTTCAAACTCTGAAAATCTGGGATTTCCCAAAATTGAAGGTGTTACCAAATGAACCCTTTAACCTGGCTTTGGAGTATCTGGAAATCACTCATTGTGATGAGCTTGAGTCTTTACCAGGGCAAATTTGGGAAAGTTTACAATCCCTTGGATCTCTATATATTAGGGGATGTAAAGGATTGCGATGCTTGCCGGAGGGTATTCGACACCTCACTTCTCTTGAGGTTCTGTATATTCGTAACTGCCCAAGATTAGAGGAACGATACAAGGAGGGAACAGGGGAGGACTGGGACAAGATTGCACATATTCCAAAAGTGAAGATTGGGTAG 2823 0.3879 MADALLGVAFENLISLLQNEFSTIFGIRSKAQKLSTTLELIKVVLQDAEKKQLTDRSIKVWLQQLKDAAYVLDDILDECSIKSYRLKGSSAFKPKNIIFRHNIGKRLKEITSRFDEIADRKNKFLLQKSVTAKEMTVEVAEWRQTWSIIAEPKVYGREDDKQKIVEHLLNQARDSSSVSVYPIVGLGGVGKTTLAQLVYNDQRVSSKFQTKIWVCVSEDFSVKRILCSIIESINNEKCDALDLDVIQRKVQELLQGKRLLLVLDDMWNKNEELELGLTQEKWNKLKAVLSGGSKGSCCLVSTRDEVVASITGTCQAHHLSGLSENECWLLFKQYAFGIDREEQVELVVIGKEIAKKCGGLPLAARALGGLMHSRNGEKEWLEIKESGLWDLPSDNSIFPAMRLSYSYLTPTLKQCFAFCAIFPKDTEMLKEELIHLWMAHGFISSRKNLEVEDVGNMVWNELCQKSFFQDIKTKEYYSGHISFKMHDLVHDLAQSIIGQECLYLEDANMTSLSKSTHHVSVDSKYLLTIGEGAFKKVDSLRTFVQLDRYTGNDHHYFFPTNCFLRVLCTSFIHRPSVWSLIHLSLEKGNSLAELHDLNLGGKLSIKGLKDVGSLSEAQEANLMGKKDLQELCLSWKRRSDEFTEPPTINGEQVLEVLQPHSNLKRFEIDYYEGLLLPSWISYLSNLVELQLTDCKNCVRLPSFGKLQSLKRLYLYYMYNLKYLDDECHDGMDVRIFPSLEVLELCRLQNIEGLLKVERGEMFPCLSRLVIESCPKLGLPCLPSLKDLNVRGFNNELLRSISTFCTLTTLFLYEGDKGIITSFPEGMFTNLTFLQTLKIWDFPKLKVLPNEPFNLALEYLEITHCDELESLPGQIWESLQSLGSLYIRGCKGLRCLPEGIRHLTSLEVLYIRNCPRLEERYKEGTGEDWDKIAHIPKVKIG 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03757 940 Gene3D - 321 409 IPR042197 -
Trre9g03757 940 PANTHER DISEASE RESISTANCE PROTEIN RP 34 773 IPR044974 GO:0006952
Trre9g03757 940 Gene3D - 411 495 IPR036388 -
Trre9g03757 940 Gene3D - 6 122 - -
Trre9g03757 940 SUPERFAMILY L domain-like 484 917 - -
Trre9g03757 940 CDD RX-CC_like 2 119 IPR038005 -
Trre9g03757 940 Gene3D Ribonuclease Inhibitor 781 923 IPR032675 -
Trre9g03757 940 Gene3D Ribonuclease Inhibitor 561 780 IPR032675 -
Trre9g03757 940 FunFam Probable disease resistance protein At1g63360 405 495 - -
Trre9g03757 940 Gene3D - 138 316 IPR027417 -
Trre9g03757 940 Pfam Rx N-terminal domain 6 100 IPR041118 -
Trre9g03757 940 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Trre9g03757 940 Coils Coil 31 51 - -
Trre9g03757 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 419 IPR027417 -
Trre9g03757 940 PRINTS Disease resistance protein signature 253 267 - -
Trre9g03757 940 PRINTS Disease resistance protein signature 357 371 - -
Trre9g03757 940 PRINTS Disease resistance protein signature 900 916 - -
Trre9g03757 940 PRINTS Disease resistance protein signature 180 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03757 Trre-Chr9 46043307 46046366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03757 165 500 WRKY Transcription Factor Family AT5G45050 25.146 3.72e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03757 - - ahf:112709874 870.922