Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03755 ATGACTTGCTCCGTCGCAGTTTCGAATTCACCGGTGTTTTCACCATCTTCATCTCTCTTCTGCAACAAATCTTCAATCAAATCTTCTTCTTCTTCTGAAACTCTAACGTTATCTCTTTCTCATCTCAAACCTATTAACTCTTCTTCTTCAACTTCTTCTTCTTCTTCTCCTTCTCCTTGTTCTTCACCTTCTTCTCCTTTTTGTCTTCGATTACCGAAAATACCCTTGGTTTTTTCATCCAATAACAACAACAACAACAACAACTCTGCTTCTTCAAATGATGCTGTTTTGAAGAGGAAACGACCCACAAGACTTGACATACCTGTTTGTTCTTCTCTTGCTTTTGGTGTTCCGGCGACTCCGTCTGCGGTGGCGCGTGATGTTGTTGAAGCTGAAGGAGATGGGTATTCTGTTTATTGTAAGAGAGGAAGGAGAGAGTATATGGAAGATCGTTTTACTGCTGGAGATAATCTTCGCGGTGAACACAAATTGGCTTTTTTTGGCGTATTTGATGGCCATGGAGGTGCCAAAGCTGCTGAATTTGCGGCAAATAACTTAGAAAAGAACATCTTGGATGAGGTGATCATGAGTGATGAAGAAGATGTTGAGGAGGCTGTGAAGCGCGGTTACCTCAATACCGATTCTGAGTTCATGAAAAAAGATCTTCATGGTGGATCTTGTTCTGTAACAGCATTGATTAGGAATGGTAACTTAATTGTATCTAACGCCGGTGATTGCCGTGCTGTCATTAGTAAAGGAGGGGTTGCTGAGGCCTTAACATCTGATCACCGACCTTCGAGGGAAGACGAAAGGGACAGAATTGAATCCCTGGGTGGTTATGTTGATTTATGTCGCGGTGTTTGGAGGATTCAAGGATCTCTTGCTGTATCGAGAAGTATCGGAGATCGACACCTAAAACAATGGGTGACAGCTGAGCCTGAGACTAAAGTTATCAGAATTGAACCTGAACATGACTTGTTAATATTAGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAGGAAGCAGTAGACATTGCTCGTCAATTCTGCGGAGGAAACAACAAACAACAAGCATTGGTAGCCTGTAAAAAGCTTGCAGAGTTGGCTGTTTCACGCGGCTCTTTGGACGATACAAGTGTTATGCTGATCAAATTGAAACAATATATTTGA 1173 0.4186 MTCSVAVSNSPVFSPSSSLFCNKSSIKSSSSSETLTLSLSHLKPINSSSSTSSSSSPSPCSSPSSPFCLRLPKIPLVFSSNNNNNNNNSASSNDAVLKRKRPTRLDIPVCSSLAFGVPATPSAVARDVVEAEGDGYSVYCKRGRREYMEDRFTAGDNLRGEHKLAFFGVFDGHGGAKAAEFAANNLEKNILDEVIMSDEEDVEEAVKRGYLNTDSEFMKKDLHGGSCSVTALIRNGNLIVSNAGDCRAVISKGGVAEALTSDHRPSREDERDRIESLGGYVDLCRGVWRIQGSLAVSRSIGDRHLKQWVTAEPETKVIRIEPEHDLLILASDGLWDKVSNQEAVDIARQFCGGNNKQQALVACKKLAELAVSRGSLDDTSVMLIKLKQYI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03755 390 SMART PP2C_4 125 384 IPR001932 -
Trre9g03755 390 Pfam Protein phosphatase 2C 136 378 IPR001932 -
Trre9g03755 390 CDD PP2Cc 135 386 IPR001932 -
Trre9g03755 390 Gene3D - 126 390 IPR036457 -
Trre9g03755 390 PANTHER PROTEIN PHOSPHATASE 81 385 IPR015655 GO:0004722|GO:0006470
Trre9g03755 390 FunFam probable protein phosphatase 2C 25 128 389 - -
Trre9g03755 390 ProSiteProfiles PPM-type phosphatase domain profile. 135 386 IPR001932 -
Trre9g03755 390 SUPERFAMILY PP2C-like 136 387 IPR036457 -
Trre9g03755 390 ProSitePatterns PPM-type phosphatase domain signature. 166 174 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03755 Trre-Chr9 46011018 46013047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03755 1 390 PP2C-type Phosphatase Gene Family AT2G30020 63.184 1.19e-160 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03755 K17506 - gmx:100797934 567