Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03753 ATGGAAATTGAATTAATTTCTAGAGAAACCATTAAACCTTCGATACCAACCCCTTCTCACCTTAGAATATATCCACTTTCTTTCATAGACAACATTATGTTCCGTACATACGCACCAACAATTGTGTTTTACAAACCAAACGATGGTATTGATCAAAATACAATAATATCACAACTCCGAAAATCCTTATCTCATCTTCTATCAAAATATTATCCCTTTGCCGGAAGATTGAAAGATAAAATTAGTGTCGAATGTAATGATCAAGGTGTGTCATTTCTAGTCACAAAGATACGAAACAAACTTTCAGAAATCCTCCAAAACCCTACAGATAAGTTGTTGAACCCTTTATTCCCCGATCAAATGCAATGGACAAATATGGATTGGAATGGAACCATAATGTGGTTTCAAATCAATTGTTTTGCATGTGGAGGAATAGCAATTAGTTCTTGTGTGTGTCACAAATTTTGTGATGTTGCAACTTATTACAACTTCATGCATGATTGGACTATCATCAACCGAAGAGTAGTAGAAGAAAAAGAGTTGTTAATATTACCCGTTTCTTTACTCGACGGAGGAGCTTCGGTTTTTCCACAAAAAGATTTACCTATTTTTCCAGAATTGTTGTTTGAGAGACAAAACAATGTGGTGTGTAAAAGATTTATTTTTCAACCCTCAATGATTAGGCTTCTCAATGAAGTGGTAACTTCTAGCTCCATGCTTTCTTCCACACATACACTTGTTGTAATCGCATGGATTTACAAGTGTGTGGTTTCAGTAATGGGATTAGATTTCAAGACAGCGTTGTTAAACATGCCTGTAAATCTTCACAAATTAATGATTCCTCCATTGTCTGAAAAGTGTGTAGGCAATATAATTTGGTTCTTGAGTATATTTGCTGATAAGAACGAAATCGAGTTGAAAGATTTGGTATGCAAAATAAAACAAGGGTTATCGGAATTTAGTGACGTTGTTCCAAAAATATTTGTAGAAAAGGGGAACGATAACTTGCCATCGATATCTGAGTTCTTGAAACAAGTTACTGAGCCTCATCCCGAGCTTCCGGAAAATAATATCATTACTTTTACTAGTTGGTGTAGGTTACCAATATATGAACTGGATTTTGGATGGGGAAAACCAACATGGTTCACCACTTCCGGTTGTTCTTCCAAGAATTTCATAATTTTGATGGATACAAAAGATGTAAATGGGATTGAAGTGGTAGTGAATTTGGAAGAGAATGTTATGGCTAAATTTGAGCATGAAGTGGAGCTTCTTCAATATGCTTCACTTAATCCAAACAATATATTACAGAAAAATAGTATACCTTTACGGTTTGTTGGGTGTGAAATTGGGTCCACTAATGTCTGA 1368 0.3501 MEIELISRETIKPSIPTPSHLRIYPLSFIDNIMFRTYAPTIVFYKPNDGIDQNTIISQLRKSLSHLLSKYYPFAGRLKDKISVECNDQGVSFLVTKIRNKLSEILQNPTDKLLNPLFPDQMQWTNMDWNGTIMWFQINCFACGGIAISSCVCHKFCDVATYYNFMHDWTIINRRVVEEKELLILPVSLLDGGASVFPQKDLPIFPELLFERQNNVVCKRFIFQPSMIRLLNEVVTSSSMLSSTHTLVVIAWIYKCVVSVMGLDFKTALLNMPVNLHKLMIPPLSEKCVGNIIWFLSIFADKNEIELKDLVCKIKQGLSEFSDVVPKIFVEKGNDNLPSISEFLKQVTEPHPELPENNIITFTSWCRLPIYELDFGWGKPTWFTTSGCSSKNFIILMDTKDVNGIEVVVNLEENVMAKFEHEVELLQYASLNPNNILQKNSIPLRFVGCEIGSTNV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03753 455 PANTHER F21J9.9 4 429 - -
Trre9g03753 455 Pfam Transferase family 1 424 - -
Trre9g03753 455 Gene3D - 1 203 IPR023213 -
Trre9g03753 455 Gene3D - 212 429 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03753 Trre-Chr9 45973966 45975333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03753 1 419 Monolignol Biosynthesis Gene Families AT5G48930 22.768 4.54e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03753 - - gmx:100806928 441.425