Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03736 ATGGCTGATGCTTTACTTGGACATGTGTTTGAGAATTTGACGTCTCTGCTTCAAAATGAATTTTCAACCATTTCTGGAATCAGTTCAAAGGCTCAAAAGCTATCAACCACCTTAGATCTGATCAAGGCTGTTCTTGAAGATGCTGAGAAGAGACAACTCACAGACCGCTCTATTAAGGTGTGGCTACGACAACTCAAAGATATTCTTGATGAGTGTTACATTAAATCCAATCGACTTAAGGGCTTATCCGCATTCAAACCAAAGAATATCATTTTCCGCCATAACATTGGAAACAGGTTGAAAGAAATAACAAGCAGATTTGACGAAATTGCAGAGAGGAAGAAAAAGTTTCTTCTACAAGAGGGTGTTACTGCTAAGGAAATGACAGTTGAAGTGGCTGAATGGCGTCAAACCAGCTCAATTATTGCTGAACCCAAAGTGTATGGACGAGAAGATGATAAAGAGAAGATTGTCGAGTTTCTTCTTAACCAAGCGAGGGACTCTAACTCACTTTCCGTCTATCCCATTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTCACTCAATTGGTCTACAATGATCAAAGGGTGAGTAGTACTACCAATTTTCATACAAAGATATGGGTTTGTGTTTCTGAAGCTTTCTCAGTCAAGAGGATTCTATGTTCCATTATAGAATCTATCAAAAGTGAGAAGTGTGGTGCCTTGGATTTAGATGTAATACAAAGAAAGGTGCAAGAACTATTGCGAGGTAAAAGATTTTTGCTAGTTTTAGATGACGTTTGGAACAAAAATGAAGAACTGAAATTTGGATTGAGCCTAGAGAAATGGAACCAGTTGAAATCAGTGTTGTCCAGTGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACTCGTGATGAGGTTGTTGCATCAATCACGGGAACATGTCAAGCTCATCATTTGTATGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGAATTGACAAAGAAGAACAATTAGAGCTTGTGGAAATAGGAAAGGAGATAGCAAAAAAGTGTGGGGGATTGCCTCTTGCTGCACAAGCACTGAGAAGTCTAATGCGCTCAAGAAGTGGAGAAAAAGAATGGCTTGAAATTAAAGAGAGTGGACTTTGGGATTCCCAGGGTGACAATTATATTTTGCCAGCCTTGACGTTGAGCTATTCTTATTTAACGCCGACCTTAAAGCAATGTTTCACTTTTTGTGCTATGTATCCAAAAGATATTGAAATCCCGAAGGATGAATTGATTCATCTATGGATGGCTCATGGATTTATTTCATCTCGGAAAAATTTGGAGGTTGAAGATGTTGGCAACATGGTTTGGAATGAACTGTGCCAAAAATCATTCTTTCAAGACATTACGATGTATGAAGGTTCTGGTGATATTTATTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAATAACAGGGCAAGAATGTTTATATTTGGAGGATTCAAACATGACTAGTTTGTCAAAAAGCACACATCATATAAGTTTTGACTCCAAAGACTTGTTATCTATCGATGAGGGTGCTCTCAAAAAAGTTGATTCCTTGCGAACATTTTTTCAGTTGAACAAATATTATACAAATAAGCATCATTACTTCCCAACAAACCGTTTTCTTCGGGTTTTATGCACAAATTTTATCCATATACCATCACTAGGGAGTTTAATTCATTTAAGTTTAGAGAAAGGTAATAGCTTGGCCGAATTACGCGATCTTTACCTCAGTGGAAATTTAAGCATTCAAGGCTTAAATAATGTTGGCAGTTTATCTGAAGCTGAAGAAGCCAAATTGATGTGTAAAAAAGACCTCCAAGAATTATGCTTGTCATGGAAAATAAGAGGTGGTGAATTTACAAAGACCCCGACTATTATTAATGCTGAGCAACTACTTGAAGTGCTTCAACCTCATTCAAATATCAAGAGTTTAGAAATAAATTACTATGAAGGATTATTGGTACCAAGTTGGATAAGTATTCTTAGTAATTTAGTTTATCTTGATCTTTTGAATTGTGAGAATTGTGTGCGGCTACCGTCATTTGGTAAACTACAATCTCTAAAAAGATTAGTATTAACCAATATGGTTAATCTAAAATACTTGGATGATGAATGTCAAGATGGTATGGAGGTGAGGATTTACCCATCTCTGAAGAAACTCTATTTAAATAATTTACCAAGCATAGAGGGGTTATTGAAAGTGGAAAGAGGGGAGATGTTTCCTTGTCTGTCTGAATTGTCAATCGATGATTGCCCTAAACTTGGACTGCCATGCCTTCCATCTCTTAAAAAACTCACTGTCATGGGATGTAACAATGAGTTACTGAGGTCAATCTCTACCTTCTGCGGTCTTACTAGTATCTACCTTGGAGCCCATGAAGGAATAATATCCTTCCCAGAGGGGATGTTCACAAACCTTACGTTTCTTCAAACTCTAAAAATACGTAATTTCCCAAAATTGAAGGAGTTACCAAATGAACCCTTTAACCTAGCATTGGAGATTTTGAAAATCTTTAACTGTGATGAGCTTGAGTCTTTACCAGAGCAAATTTGGGAGAGTCTACAATCCCTTCGATCTCTAAAGATTGATTGTTGTAAAGGATTGCGTTTCTTGCCGGAGGGTATTCGACACCTCACTTCTCTTGAGAGTCTGACAATTGTTGAATGCCCAACATTAAAGGAACGATGCAAGGAGGGAACAGGGGAGGACTGGTACAAGATTGCACATATTCCAAAATTAGACATTCGGTGA 2799 0.3755 MADALLGHVFENLTSLLQNEFSTISGISSKAQKLSTTLDLIKAVLEDAEKRQLTDRSIKVWLRQLKDILDECYIKSNRLKGLSAFKPKNIIFRHNIGNRLKEITSRFDEIAERKKKFLLQEGVTAKEMTVEVAEWRQTSSIIAEPKVYGREDDKEKIVEFLLNQARDSNSLSVYPIVGLGGVGKTTLTQLVYNDQRVSSTTNFHTKIWVCVSEAFSVKRILCSIIESIKSEKCGALDLDVIQRKVQELLRGKRFLLVLDDVWNKNEELKFGLSLEKWNQLKSVLSSGSKGSSCLVSTRDEVVASITGTCQAHHLYGLSENECWLLFKQYAFGIDKEEQLELVEIGKEIAKKCGGLPLAAQALRSLMRSRSGEKEWLEIKESGLWDSQGDNYILPALTLSYSYLTPTLKQCFTFCAMYPKDIEIPKDELIHLWMAHGFISSRKNLEVEDVGNMVWNELCQKSFFQDITMYEGSGDIYFKMHDLVHDLAQSITGQECLYLEDSNMTSLSKSTHHISFDSKDLLSIDEGALKKVDSLRTFFQLNKYYTNKHHYFPTNRFLRVLCTNFIHIPSLGSLIHLSLEKGNSLAELRDLYLSGNLSIQGLNNVGSLSEAEEAKLMCKKDLQELCLSWKIRGGEFTKTPTIINAEQLLEVLQPHSNIKSLEINYYEGLLVPSWISILSNLVYLDLLNCENCVRLPSFGKLQSLKRLVLTNMVNLKYLDDECQDGMEVRIYPSLKKLYLNNLPSIEGLLKVERGEMFPCLSELSIDDCPKLGLPCLPSLKKLTVMGCNNELLRSISTFCGLTSIYLGAHEGIISFPEGMFTNLTFLQTLKIRNFPKLKELPNEPFNLALEILKIFNCDELESLPEQIWESLQSLRSLKIDCCKGLRFLPEGIRHLTSLESLTIVECPTLKERCKEGTGEDWYKIAHIPKLDIR 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03736 932 Gene3D - 406 489 IPR036388 -
Trre9g03736 932 PRINTS Disease resistance protein signature 675 691 - -
Trre9g03736 932 PRINTS Disease resistance protein signature 248 262 - -
Trre9g03736 932 PRINTS Disease resistance protein signature 352 366 - -
Trre9g03736 932 PRINTS Disease resistance protein signature 173 188 - -
Trre9g03736 932 CDD RX-CC_like 11 112 IPR038005 -
Trre9g03736 932 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 414 IPR027417 -
Trre9g03736 932 Coils Coil 31 51 - -
Trre9g03736 932 PANTHER DISEASE RESISTANCE PROTEIN RP 34 767 IPR044974 GO:0006952
Trre9g03736 932 FunFam Probable disease resistance protein At1g63360 400 489 - -
Trre9g03736 932 Pfam Rx N-terminal domain 6 71 IPR041118 -
Trre9g03736 932 Pfam NB-ARC domain 150 380 IPR002182 GO:0043531
Trre9g03736 932 Gene3D - 130 311 IPR027417 -
Trre9g03736 932 Gene3D - 6 115 - -
Trre9g03736 932 Gene3D - 316 404 IPR042197 -
Trre9g03736 932 Gene3D Ribonuclease Inhibitor 774 915 IPR032675 -
Trre9g03736 932 Gene3D Ribonuclease Inhibitor 566 773 IPR032675 -
Trre9g03736 932 SUPERFAMILY L domain-like 469 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03736 Trre-Chr9 45716360 45719395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03736 176 494 WRKY Transcription Factor Family AT5G45050 26.625 2.47e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03736 - - mtr:11405813 1014.22