Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03720 ATGTCTTTTACAGCAGCAACAATATTTGCTTTTCTTCTCTTCACTTTCTCATACTTTTTATTCAAACTCTTCCTACATCCAAAACAAACCACTATAAACCAAAAACAGCCACCAGGACCATCGACACTACCAATAATTGGAAACCTCCATATATTAGGCACACTTCCACATCGAACACTTCATTCACTCTCCAAAATATATGGTCCAATTATGTTCTTACAACTTGGTCAAGTTCCAGCTATTGTCATTTCATCTTCAAAAGTTGGTGAATCATTTTTCAAAACCCATGACCTTGTTTTTTCAAGCCGACCAAGGATTCAAGGATCTGACCTCATGTCTTATGGTTCCAAAGGAATAGGTTTTTGTGAATATGGTCCTTATTGGCGTAGTGTGAGGAAATTTTGCACTTTGAATCTTCTTAGTGCTTCGAAAGTTGAGATGTTTGGTCCTATAAGGAAACACGAGTTGGATGCTTTGGTTAAATCTTTGGAAAAAGCTGCTTTGGTAGGTGAGGTTGTGAATCTTAGTGAGGTTGTAGAGAATCTTATTGAGGATATTGTGTATAAGATGATATTGGGTAGAAGTAAACATGAACAATTTGACTTGAAGAAGTTGGTTCAAGAAGGATTGATTTTGATTGGAGCTTTTAATTTGGCTGATTATGTTCCTTGGCTAGGTGTTTTTGATCTTCAGGGATTAACAAGAGCTTGCAAGAAAGTCAGTAAATCACTTGATGAGGTGCTGGAAGTGATAATAACAGAGCATGAGCAAGCTACTAATGTACACAAAAATTGTCATGAAGATTTCGTAGACATACTTCTTTCAATTATGCACCAAAGCATTGATCAAGAAAATGATGAAAATCTTTTCATTGATCGAACTAACGTCAAGGCTATTTTACTTGACATGATAGTTGCAGCAATTGATACATCTGCTACCTCCATTGATTGGATTTTATCTGAACTTTTAAGACATCCAAGAGTGATGAAAATTCTTCAAGATGAAATTCAAAATGTAGTAGAAAATAAGAGAATGGTTGAAGAAAAGGATTTGAAGAGGTTGGATTATTTAGATATGGTGATTGATGAAGCGTTGAGGCTATATCCGGTTGCACCCTTACTAGTCCCTCGTGAATGTAGAGAGAATATAACGATTGATGGCTATTTTATAAAGGAAAAGACACGAGTTATAGTAAATGCATGGGCAATCGGGAGAGATCATAATGTTTGGTCAGAAAATGCAGAAGAATTTTATCCAGAAAGATTTATTGACAAGAAAATAAATTATTTAGGACAAGAGTTTGAATCTATACCATTTGGTTCTGGTCGAAGGCGTTGTCCTGGAATTAAATTAGGTTTAATTACTATTAAGTTGGTAATAGCTCAATTGGTGCATTGCTTTAATTGGCAACTTCCCTATAATATCAATCCTTCTGATTTAAATATGGAGGAGAAATTTGGACTTACTATACCAAGAGCTCAGCATTTGTATGCAATACCGAGTTATCGTTTGGGTGTTGTCAAGCATGAATAA 1533 0.3536 MSFTAATIFAFLLFTFSYFLFKLFLHPKQTTINQKQPPGPSTLPIIGNLHILGTLPHRTLHSLSKIYGPIMFLQLGQVPAIVISSSKVGESFFKTHDLVFSSRPRIQGSDLMSYGSKGIGFCEYGPYWRSVRKFCTLNLLSASKVEMFGPIRKHELDALVKSLEKAALVGEVVNLSEVVENLIEDIVYKMILGRSKHEQFDLKKLVQEGLILIGAFNLADYVPWLGVFDLQGLTRACKKVSKSLDEVLEVIITEHEQATNVHKNCHEDFVDILLSIMHQSIDQENDENLFIDRTNVKAILLDMIVAAIDTSATSIDWILSELLRHPRVMKILQDEIQNVVENKRMVEEKDLKRLDYLDMVIDEALRLYPVAPLLVPRECRENITIDGYFIKEKTRVIVNAWAIGRDHNVWSENAEEFYPERFIDKKINYLGQEFESIPFGSGRRRCPGIKLGLITIKLVIAQLVHCFNWQLPYNINPSDLNMEEKFGLTIPRAQHLYAIPSYRLGVVKHE 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03720 510 Pfam Cytochrome P450 37 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 Gene3D Cytochrome P450 27 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 SUPERFAMILY Cytochrome P450 37 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 FunFam Cytochrome P450 83B1 24 499 - -
Trre9g03720 510 CDD CYP71-like 67 496 - -
Trre9g03720 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Trre9g03720 510 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 Coils Coil 329 349 - -
Trre9g03720 510 PANTHER CYTOCHROME P450 93A3-LIKE 12 504 - -
Trre9g03720 510 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03720 510 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03720 Trre-Chr9 45616261 45618830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03720 37 501 Cytochrome P450 AT3G48310 39.056 6.53e-121 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03720 - - psat:127113357 770.77