Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03718 ATGGAAATGGAATTAGTTTCTAGAGAAACCATCAAACCATCATCACCAACTCCTTCTCACCTTAGAATATATCCACTTTCATTTTTAGACAACATTATTTACCGTAACTATATACCATTGCTTTACTTTTACAACCAAACCAAAGATAATGACCAAAATTTCAAAATTTCACAACTTCGAAAATCTTTATCTCAACTTCTATCCAAATACTACCCTTTTGCTGGAAGATTGAAAGATAAAATTACCATTGAATGTAATGATCATGGTGTGTCATTTTTAGTCGCAAAGATAAAAAACAATCTATCAGAGATTCTCCAAAATCCGACAGAAAAATTGTTGGACTCTTTGTTCCCCGATGAATTGCAATGGAAAGACATGGATTGGAGTGACACTTTAATAGCCATTCAAATCAATGGTTTTTCATGTGGAGGAATGGCAATAAGTATTTGCATGAGTCACAAAATTGGTGATGCTGCTACTCTTTTCAACTTCATGAATGATTGGTCCATCATCAACCAAAAATTACATGAAGAAGATCAAAACGGGTTATTAGCATTATTACCCTTCGATGGAGGAGCTTCTGTTTTTCCACAAAAGGATTTACCTATTTTCCCGGAACTTGTGCATATTAAGAGAGAAAACAATGTGGTGTGTAAAAGGTTTGTGTTTCAACCCTCAATGATTAAGTTACTCAAGGCAATGGTAAATTCTAGTTCCGTGGATTTAGCTCCTACACGCGTACAATTAGTAATGGCATGGATTTACAAACGTGCGGTTTCAATAATGGGATTAGATTTCAAGACGGCATTGTTTACCATGGCTGTGGATCTTCGCAAAAGAATGGTTCCACCATTGTCTGAAAAATGTGTAGGGAATATAGTATGGATCTCGTCTATGTTTGCGGATAAGGAGGAAATGGAATTAGAGGATTTGGTATGTAAAATAAAAGAAGCGTTATCCGAGTTTTGTGACGTTTATCCAAAAATGTTTGGAGGGAAAGAAAAGGAACATTTTTCAATGATATCCGAGTGGTTGAAACAAGTAACAGGGCCGCTTTTTGAGAATGAAAATTCGTTTAATTTTAGTAGTTGGTGTAAGTTTCCCATGTATGAAGCTGATTTTGGGTGGGGAAAACCAACATGGGTCACCACTTGTGGTTGTTTTTCGAGGAAAGTAATACTTCTAATGGATACGAGAGATGGAGATGGGATTGAAGCCGTTTTGAATATGGAAGAAAATTATATGGCTAAGTTTGAGCATGATGTAGAGCTTCTTCAAAATGCATCTCTTAAATCTTATTAA 1302 0.3564 MEMELVSRETIKPSSPTPSHLRIYPLSFLDNIIYRNYIPLLYFYNQTKDNDQNFKISQLRKSLSQLLSKYYPFAGRLKDKITIECNDHGVSFLVAKIKNNLSEILQNPTEKLLDSLFPDELQWKDMDWSDTLIAIQINGFSCGGMAISICMSHKIGDAATLFNFMNDWSIINQKLHEEDQNGLLALLPFDGGASVFPQKDLPIFPELVHIKRENNVVCKRFVFQPSMIKLLKAMVNSSSVDLAPTRVQLVMAWIYKRAVSIMGLDFKTALFTMAVDLRKRMVPPLSEKCVGNIVWISSMFADKEEMELEDLVCKIKEALSEFCDVYPKMFGGKEKEHFSMISEWLKQVTGPLFENENSFNFSSWCKFPMYEADFGWGKPTWVTTCGCFSRKVILLMDTRDGDGIEAVLNMEENYMAKFEHDVELLQNASLKSY 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03718 433 Gene3D - 1 203 IPR023213 -
Trre9g03718 433 PANTHER F21J9.9 4 426 - -
Trre9g03718 433 Coils Coil 301 321 - -
Trre9g03718 433 Pfam Transferase family 2 424 - -
Trre9g03718 433 Gene3D - 213 431 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03718 Trre-Chr9 45578975 45580276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03718 1 419 Monolignol Biosynthesis Gene Families AT5G48930 23.266 1.43e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03718 - - gmx:100806928 474.937