Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03712 ATGGATCAAACTACCATCATAAACTTTAACAACACCTTTTCGAAAACCAACTTCATTGCCTTCTTTATCTTCCTCTTGGTGCTACTCAAAATAGTTAAAAAAAGGAGTAATAAAGGTTCCAATGTCAATTTACCACCAGGACCATGGACATTGCCCCTCATAGGAAACTTGCATCAGATTATTATGAGCAGGTCATTGCCCCATCGCTGCTTCAAAAAATTGGCAGAGAAATATGGATCATTGACTTACCTAAAATTAGGGGAGGTGCCACACATAATAGTTAGTTCACCAGAAATGGCCAAAGAGATTATGAAAACACATGACCACACCTTTTCTAATAGGCCAAACCTTCTTTTAGCCAATATACTTACTTATAATTCTACCGATATTTTATTTTCTCCGTATGGAGAATATTGGAGGCAATTACGAAAGTTATGCGTTATAGAGCTATTAAGTGAAAAACGTGTCCAATCATTTAGGTCCATACGAGAAGAAGAGTGTTCAATACTAGTTAAATCAATTTCTTCAAGTGAAGGATTAATTGTTAATCTCAATCATAAGATTATCTCAATGACAAGTGGGATAATAGCGCGAGCAGCTTTTGGAAAAAAGAGCAAACATCAACAAGTATTTATATCAAAATTGGATGAAGTAATAGACCTATTCGGAGGATTTTGTATTGCGGATTTGTATCCTTCATTTAAAATGCTTCAATGGGTGAGTTCAGCGAAGACTAAAATGGAAAAAATTCAAAGAGAGCTTGATATCATATTGCAAGACATCATCAATGATCACAAAAGTAGTACTCATAGAGAAGAAAGCAAAGATGAAGATCTTGTTGATGTTCTTCTAAAAATTCAAAAAGAAAATGATCACTCACAACATCCTTTAACTGACAACAATATTAAAGCAGTAATTCAGGACATTTTTGCTGCTGGTTCTGCAACATCGTCAGAGGTTGTGTTATGGGGGATGTCTGAGATGGTAAAGAATCCAAATGTAATGGAAGCAGCACAAGCTGAGGTAAGAAGAGTGTTTGATAAAAAGGGGTGTGTAGATGAGACAGAGATGCACCAATTGATATACTTAAAGTCTGTCATCAAAGAAACAATGAGGTTTCATCCTCCTATACCATTGTTGTTTCCAAGAGAAAGTAGGAAGCGATGCCAAATCAATGGTTATGATATCCCAGCCAAGACAAGGGTTGTCGTCAATATTTGGGCAATTGGAAGAGATCCAAAATATTGGGTTGAAGCTGAGAGTTTTAAACCTGAGAGATTTATTAATAGTGAAATTAATTTTAATGGTACAAATTTTGAATACATACCATTTGGTGCTGGAAGGAGGATGTGTCCAGGCATTACATTTGGCTTACCCAACGTGGAATTGCCTCTTGCTCAATTACTTTACCACTTTGATTGGAAGCTTCCCAATGAAATGAAGAATGAAGAACTAGATATGACTGAGTTATTTGGGTCTACATTACGAAAGAAACATGACCTATGCTTGATTCCTTTTACTCGTCATCTTTGA 1533 0.3594 MDQTTIINFNNTFSKTNFIAFFIFLLVLLKIVKKRSNKGSNVNLPPGPWTLPLIGNLHQIIMSRSLPHRCFKKLAEKYGSLTYLKLGEVPHIIVSSPEMAKEIMKTHDHTFSNRPNLLLANILTYNSTDILFSPYGEYWRQLRKLCVIELLSEKRVQSFRSIREEECSILVKSISSSEGLIVNLNHKIISMTSGIIARAAFGKKSKHQQVFISKLDEVIDLFGGFCIADLYPSFKMLQWVSSAKTKMEKIQRELDIILQDIINDHKSSTHREESKDEDLVDVLLKIQKENDHSQHPLTDNNIKAVIQDIFAAGSATSSEVVLWGMSEMVKNPNVMEAAQAEVRRVFDKKGCVDETEMHQLIYLKSVIKETMRFHPPIPLLFPRESRKRCQINGYDIPAKTRVVVNIWAIGRDPKYWVEAESFKPERFINSEINFNGTNFEYIPFGAGRRMCPGITFGLPNVELPLAQLLYHFDWKLPNEMKNEELDMTELFGSTLRKKHDLCLIPFTRHL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03712 510 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 FunFam Cytochrome P450 71D8 37 505 - -
Trre9g03712 510 CDD CYP71-like 77 501 - -
Trre9g03712 510 SUPERFAMILY Cytochrome P450 45 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 Coils Coil 240 260 - -
Trre9g03712 510 Pfam Cytochrome P450 45 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 Gene3D Cytochrome P450 37 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03712 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Trre9g03712 510 PANTHER OS08G0105600 PROTEIN 70 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03712 Trre-Chr9 45527376 45529578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03712 19 505 Cytochrome P450 AT5G25120 42.105 6.00e-133 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03712 - K23806 mtr:11442302 729.169