Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03709 ATGTCTTTTGCAGTAGCATCAACAATATTTGCTTTTCTACTCTTCACTTTCACATACTTTTTATTAAAACTCTTCTTGCATCCAAAACAAAATACTATAAATCAAAAAAGACCACCAGGTCCACCAACACTACCAATAATCGGAAACCTTCACTTATTAGGCACACTTCCACATCGAACACTTCATTCACTCTCCAAAAAATATGGTCCAATTATGTCCTTACAATTTGGTCAAGTCCCAGCTGTTATCATTTCATCTTCAAAAGCTGCTGAATCATTCTTTAAAACCCACGACATCGTTTTTTCAAGTCGACCAAAGACTCAAGCATCTGAGCTCATTGCTAATGGGTCAAAAGGGGTGGGTTTTTCTGAGTATGGTCCTCATTGGCGCAACGTGAGGAAACTTTGCACTGTAAATCTTCTTAGTGCTTCAAAAGTTGAGATGTTTGGTCCTAGCAGGAAACAAGAGTTGGATGTTTTAGTTAAATCTTTGGAGAAAGCTGCTTTGGTAGGCGAGGTTGTGAATCTTAGTGAAGTTGTATGGAATCTTATTGAGGATATTGTGTATAAGATGATTTTGGGTGGGACTAAGCATGAGCAATTTGACGTGAAGAAGTTGGCTAAAGAAGGAATCGCTTTAATTGGAGCTTTTAATTTGGTTGATTGTGTTCCTTGGCTAGGTGCTTTTGATCTTCAGGGATTAACAAGAGCTTGCAAGAAAGTCAGTAAATCACTTGATGAGGTGCTGGAAGTGATAATAACAGAGCATGAGCAAGCTACTAATGTATGCACAAATCGACAAGAAGATTTCGTCGACATTCTTCTTTCAATTATGCACCAAAGCATTGATCACAAAAATGATCAAAATCTTGTCATTGATCGAACTAACGTCAAGGCTATTTTACTTGACATGATAGCTGCAGCAATTGGGACATCTCCTAACTTGATTGAGTGGATTTTATCTGAACTTTTAAGACACCCAAGAGTGATGAAAATTCTTCAAGAAGAAATACAAAATGAAGTAGGGAATAAAAGAATGGTTAAAGAGGAGGATTTGAAGAAGTTTAATTACTTAGATATGGTAATCGATGAAACCTTAAGACTTTATCCTTCACCCTTATCGGTCCCCCGTGAATGTAGAGAAAGCATAACTATTGATGGATATTTTATAAAGGAAAAGTCTAGGGTCATAGTAAATGCATGGGCAATAGGAAGAGATCCTAATGTTTGGTCAGAAAATGCTGAAGAATTTTATCCTGAGAGATTTATTGATAAGAAAATGAATTATGAAGGCCAAGAGTTTGACTCTATACCATTTGGTGCTGGTCGTAGGCGTTGTCCTGGGATTAAATTGAGTTTAGTTACTGTGAAGTTGGTAACAGCTCAATTGGTGCATTGCTTTAATTGGAAACTTCCATATAATATTAGTCCTTCCAATTTGAATATGGAGGAGAAATTTGAACTTGCTATGTCAAGAGCTCAGAACTTGTACGCCATACCGAGTTATCGTTTGGCTGATGTCAAGCATGAATAA 1533 0.3699 MSFAVASTIFAFLLFTFTYFLLKLFLHPKQNTINQKRPPGPPTLPIIGNLHLLGTLPHRTLHSLSKKYGPIMSLQFGQVPAVIISSSKAAESFFKTHDIVFSSRPKTQASELIANGSKGVGFSEYGPHWRNVRKLCTVNLLSASKVEMFGPSRKQELDVLVKSLEKAALVGEVVNLSEVVWNLIEDIVYKMILGGTKHEQFDVKKLAKEGIALIGAFNLVDCVPWLGAFDLQGLTRACKKVSKSLDEVLEVIITEHEQATNVCTNRQEDFVDILLSIMHQSIDHKNDQNLVIDRTNVKAILLDMIAAAIGTSPNLIEWILSELLRHPRVMKILQEEIQNEVGNKRMVKEEDLKKFNYLDMVIDETLRLYPSPLSVPRECRESITIDGYFIKEKSRVIVNAWAIGRDPNVWSENAEEFYPERFIDKKMNYEGQEFDSIPFGAGRRRCPGIKLSLVTVKLVTAQLVHCFNWKLPYNISPSNLNMEEKFELAMSRAQNLYAIPSYRLADVKHE 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03709 510 Pfam Cytochrome P450 38 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 PANTHER CYTOCHROME P450 93A3-LIKE 14 505 - -
Trre9g03709 510 Coils Coil 330 350 - -
Trre9g03709 510 CDD CYP71-like 67 496 - -
Trre9g03709 510 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Trre9g03709 510 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 Gene3D Cytochrome P450 28 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03709 510 FunFam Cytochrome P450 83B1 25 499 - -
Trre9g03709 510 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03709 Trre-Chr9 45438196 45440378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03709 38 501 Cytochrome P450 AT3G48310 38.197 3.49e-116 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03709 - - psat:127113357 741.495