Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03707 ATGGATCAAACTACCATCATAAACATTAACAAGACCTTTTCGAAAACCTCCTTCATTGCCTTCTTTATCTTCCTCTTGGTGCTACTCAAAATATTTAAAAAATGGAGTAGTAAAGGTTCCAATGTCAATTTACCACCAGGACCATGGACATTGCCCCTCATAGGAAACATGCATCAGATTATTATGAGCAGGTCATTGCCCCATCACTGCTTCAAAAAAGTGGCAGAGAAATATGGATCATTGATTTACCTAAAATTAGGGGAGGTGCCACACATAATAGTTAGTTCACCAGAAATGGCCAAAGAGATTATGAAAACACATGACCTCACCTTTTGTGATAGGCCAAACCTTCTTTTATCCAATATACTTACTTATAATGCTACCGATATTGTATTTTCTCCGTATGTAGAACATTGGAGGCAATTACGAAAGTTATGCGTTATAGAGCTATTAAGTGAAAAACGTGTCCAATCATTTAGGTCCATACGAGAAGAAGAGGGTTCAATACTAGTTAAATCAATTTCTTCAAGTGAAGGATCAATTGTTAATCTCAATCATAAGATTACCTCAATGATAAGTGGGATAACAGCGCGAGCAACTTTTGGAAAAAAGAGCAAACATCAACAAGTATTTATATCAAAATTGAATGAAGTAATAGACCTATTGGGAGGATTTTGTATTGCGGATTTGTATCCTTCATTTAAAATGCTTCAATGGGTGAGTTCAGCGAAGACTAAAATGGAAAAAATTCATAGAGAGCTTGATATCATAGTGCAAGACATCATCAATGATCACAAAAGTAGTCTTAGTGAAGAAAGCAAAGATGAAGATCTTGTTGATGTTCTTCTAAGAATTCAAAAAGAAAATGATCACTCACAACATCCCTTGACTGACAACAATATTAAAGCAGTAATTCTGGACATGTTTGCTGCTGGTTCTGGAACATCGTCAGAGGTTGTGATATGGGGGATGTCTGAGATGGTAAAGAATCCAAATGTAATGGAAGCAGCACAAGCTGAGGTAAGAAGAGTGTTTGATAAAAAGGGGTGTGTAGATGAGACAGAAATGCACCAATTGATATACTTAAAGTCTGTCATCAAAGAAACAATGAGGTTGCATCCTCCTATACCATTGTTGCTTCCAAGAGAAAGTAGGAAGCAATGCCAAATCAATGGTTATGATATCCCAGCCAAGACAAGGGTTGCCATCAATGTTTGGGCAATTGGAAGAGATCCAAAATATTGGGTTGAAGCTGAGAGTTTTAAACCTGAGAGATTTATTAATAGCGAAATTAATTTTAAAGGTACAAATTTTAAATACATACCATTTGGTGCTGGAAGGAGGATGTGTCCAGGCATTACATTTGCCTTACCCAACGTTGAATTGCCTCTTGCTCAATTACTTTACCACTTTGATTGGAAGCTTCCAAATAAAATGAAAAATGAAGAACTAGATATGACTGAGTTATTTGGGATTGCATTACGAAAGAAACATGACCTATGCTTGATTCCTTTTACTCGTCATCTTTGA 1530 0.3627 MDQTTIININKTFSKTSFIAFFIFLLVLLKIFKKWSSKGSNVNLPPGPWTLPLIGNMHQIIMSRSLPHHCFKKVAEKYGSLIYLKLGEVPHIIVSSPEMAKEIMKTHDLTFCDRPNLLLSNILTYNATDIVFSPYVEHWRQLRKLCVIELLSEKRVQSFRSIREEEGSILVKSISSSEGSIVNLNHKITSMISGITARATFGKKSKHQQVFISKLNEVIDLLGGFCIADLYPSFKMLQWVSSAKTKMEKIHRELDIIVQDIINDHKSSLSEESKDEDLVDVLLRIQKENDHSQHPLTDNNIKAVILDMFAAGSGTSSEVVIWGMSEMVKNPNVMEAAQAEVRRVFDKKGCVDETEMHQLIYLKSVIKETMRLHPPIPLLLPRESRKQCQINGYDIPAKTRVAINVWAIGRDPKYWVEAESFKPERFINSEINFKGTNFKYIPFGAGRRMCPGITFALPNVELPLAQLLYHFDWKLPNKMKNEELDMTELFGIALRKKHDLCLIPFTRHL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03707 509 Gene3D Cytochrome P450 37 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 CDD CYP71-like 77 500 - -
Trre9g03707 509 Pfam Cytochrome P450 45 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 FunFam Cytochrome P450 71D8 37 504 - -
Trre9g03707 509 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 PANTHER OS08G0105600 PROTEIN 69 506 - -
Trre9g03707 509 SUPERFAMILY Cytochrome P450 45 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03707 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03707 Trre-Chr9 45422853 45424603 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03707 45 505 Cytochrome P450 AT3G26320 42.004 9.02e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03707 - - mtr:11442302 726.472