Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03704 ATGGATCAAACTACCATCATAAACTTTAACAACACCTTTTCAAAAACCACCTTCATTGCCTTCTTTATCTTCCTCTTGGTGCTACTCAAAATATTTAAAAAATGGAGTAATAAAGGTTCCAATGTCAATTTACCACCAGGACCATGGACATTGCCCCTCATAGGAAACATGCATCAGATTATTATGAGCAAGTCATTGCCCCATCAATGCTTCAAAAAATTGGCAGAGAAATATGGATCATTAATGTACCTAAAATTAGGGGAGGTGCCACACATAATAGTTAGTTCACCAGAAATGGCCAAAGAGATTATGAAAACAAATGACCTCACCTTTTGTGATAGGCCAAACCTTCTTTTATCCACTATATTTAGTTATAATGCTACAGATATTGCATTTTCTCCGTATGGAGAATATTGGAGGCAATTACGAAAGATATGCGTTATAGAGCTATTAAGTGAAAAACGTGTCCAATCGTTTAGGTCGATACGAGAAGAAGAGGGTTCAATACTAGTTAAATCAATTTCTTCAAGTGAAGGATCAATTGTTAATCTCAATCATAAGATTACCTCAATGATAAGTGGGATAACTGCGCGAGCAGCTTTTGGAAAAAAGAGCAAACATCAACAAGTATTTATATCAAAAGTGAATGAAGTAATAGACCTATTGGGAGGATTTTGTATTGCGGATTTGTATCCTTCATTTAAAATGCTTCAATGGGTGAGTTCAGCGAAGACTAAAATGGAAAAAATTCATAGAGAGCTTGATATCATATTGCAAGACATCATCAATGATCACAAAAGTAGTACTCATAGAGAAGAAAGCAAAGATGAAGATCTTGTTGATGTTCTTCTCAAAATTCAAAAAGAAAATGATCACTCACAACATCCCTTGAGTGACAACAATATTAAAGCAGTAATTCTGGACGTGTTTGCTGCTGGTTCTGGAACATCATCAGAAGTTGTGTTATGGGGGATGTCTGAGATGGTAAAGAATCCAAATGTAATGAAAGCAGCACAAGCTGAGGTAAGAAGAATGTTTGATAAAAAGGGATGTGTAGATGAGACAGAGATGCACCAATTGATATACTTAAAGTCTGTCATCAAAGAAACAATGAGGTTGCATCCTCCTATACCATTGTTGCTTCCAAGAGAAAGTAGGAAGCGATGCCAAATCAATGGTTATGATATCCCAGCCAAGACAAGGGTTACCGTCAATGCTTGGGCAATTGGAAGAGATCCAAAATATTGGGTTGAAGCTGAGAGTTTTAAACCTGAGAGATTTATTAATAGCGAAATTAATTTTAAAGGTACAAATTTTGAATACATACCATTTGGTGCTGGAAGGAGGATGTGTCCAGGCATTACATTTGGCTTACCCAACGTGGAATTGCCTCTTGCTCAATTACTTTACCACTTTGATTGGAAGCTTCCCAATAAAATGAAGAATGAAGAACTGGATATGACTGAGTTATTTGGGATTACATTACGAAAACGTGACCTATGCTTAATTCCTTTTACTCGTCATCTTTGA 1530 0.3621 MDQTTIINFNNTFSKTTFIAFFIFLLVLLKIFKKWSNKGSNVNLPPGPWTLPLIGNMHQIIMSKSLPHQCFKKLAEKYGSLMYLKLGEVPHIIVSSPEMAKEIMKTNDLTFCDRPNLLLSTIFSYNATDIAFSPYGEYWRQLRKICVIELLSEKRVQSFRSIREEEGSILVKSISSSEGSIVNLNHKITSMISGITARAAFGKKSKHQQVFISKVNEVIDLLGGFCIADLYPSFKMLQWVSSAKTKMEKIHRELDIILQDIINDHKSSTHREESKDEDLVDVLLKIQKENDHSQHPLSDNNIKAVILDVFAAGSGTSSEVVLWGMSEMVKNPNVMKAAQAEVRRMFDKKGCVDETEMHQLIYLKSVIKETMRLHPPIPLLLPRESRKRCQINGYDIPAKTRVTVNAWAIGRDPKYWVEAESFKPERFINSEINFKGTNFEYIPFGAGRRMCPGITFGLPNVELPLAQLLYHFDWKLPNKMKNEELDMTELFGITLRKRDLCLIPFTRHL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03704 509 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 FunFam Cytochrome P450 71D8 37 504 - -
Trre9g03704 509 Pfam Cytochrome P450 45 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Trre9g03704 509 SUPERFAMILY Cytochrome P450 45 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PANTHER OS08G0105600 PROTEIN 70 505 - -
Trre9g03704 509 CDD CYP71-like 77 498 - -
Trre9g03704 509 Gene3D Cytochrome P450 37 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03704 509 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03704 Trre-Chr9 45398620 45400838 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03704 18 508 Cytochrome P450 AT1G13110 40.675 1.19e-133 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03704 - - mtr:11442302 731.48