Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03698 ATGTCCTTACAACTTGGTCAAGTTCCAGCTATTATCATTTCATCTTCAAAAGCAGCTGAATTATTCCTTAAAACACATGACATCAATTTTGCAAGCAGACCAAAGGTTACAGCATCTGAACTCTTGTCTTATGGATCTAAAGGGATTGCTTTTTCTGAGTATAGTCCTTATTGGCGTAGTGTGAGAAAACTTTGCATTGTAGAACTTTTTAGTGCTTCAAAAGTTGAGATGTTTAGACCTATTAGGAAGGAGAAGTTGGATGTTTTGGTTAAATCATTGGAGAAAGCTGCTTTGGTAAGTGAGGTTGTGGATGCTAGTGAGGTTGTAGAAAATCTTATTGAAGATATTGTGTATAAGATGATATTGGGTACGAGTAAACATGAACAATTTGACTTAAAGAATTTGGTTCGAGAAGCAACGATTTTGGTTGGAGCTTTTAATCTTGCTGATTATGTTCCTTGGTTAGGTGCACTTGATATTCAGGGGTTAACACGATCGTGCAAGAAAACGAGTAAATCACTTGATGTGGTGCTTGAAGTGATTTTGAAAGAACATGAACAAATGTCTAATGTAGACAAAACTCATCATGAAGACTTTGTCAACATACTTCTTTCAAATATGAACAAAGCCATCGATCCAGAAAATGATCAAAATCATGTTATTGATCGAAGTAACGTTAAGGCAATTTTACTAGACATGATTGTGGCAGCAGTTGATACATCAGCTACCACAATTGAATGGGCCTTAACCGAACTTCTAAGGCACCCAAGAGTTATGAAAAATCTTCAAGATGAGATACAAAATGAAGTTGGAACTATGAGAATGGTTGAAGAAAAGGATTTGAAGAAGTTAAGTTACTTAGATATGGTGATTGATGAAACGTTAAGACTATATCCTGTTGCACCCTTACTAGTCCCTCGTGAATGTAGAGAGAGTATAACAATTGATGGTTATTTTATTAAGGAGAAGACACGAGTTATAGTAAATGCATGGGCTATAGGGAGAGATTCGAATGTTTGGTCAGACAATGTTGAAGAATTTTATCCGGAGAGATTCATCAACAAGAAAATGAATTATCTAGGACAAGATTTTGAATCTATACCATTTGGTTCTGGTCGCAGACGTTGTCCTGGAATTCAATTGGGTTTAGTTAGTGTTAAATTGGTTTTAGCTCAATTGGTGCATTGTTTTAATTGGAAACTTCCCAATAATATCAATCCTTCCAATTTAAATATGGAGGAGAAATTTGGACTTTCTATACCAAGAGCTCAACACTTGCATGCAATTCCAAGTTACCGTTTGTCATGTGATTTCTGTTAA 1320 0.3553 MSLQLGQVPAIIISSSKAAELFLKTHDINFASRPKVTASELLSYGSKGIAFSEYSPYWRSVRKLCIVELFSASKVEMFRPIRKEKLDVLVKSLEKAALVSEVVDASEVVENLIEDIVYKMILGTSKHEQFDLKNLVREATILVGAFNLADYVPWLGALDIQGLTRSCKKTSKSLDVVLEVILKEHEQMSNVDKTHHEDFVNILLSNMNKAIDPENDQNHVIDRSNVKAILLDMIVAAVDTSATTIEWALTELLRHPRVMKNLQDEIQNEVGTMRMVEEKDLKKLSYLDMVIDETLRLYPVAPLLVPRECRESITIDGYFIKEKTRVIVNAWAIGRDSNVWSDNVEEFYPERFINKKMNYLGQDFESIPFGSGRRRCPGIQLGLVSVKLVLAQLVHCFNWKLPNNINPSNLNMEEKFGLSIPRAQHLHAIPSYRLSCDFC 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03698 439 PRINTS E-class P450 group I signature 245 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 PRINTS E-class P450 group I signature 225 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 PRINTS E-class P450 group I signature 288 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Trre9g03698 439 Gene3D Cytochrome P450 1 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 PANTHER CYTOCHROME P450 93A3-LIKE 1 434 - -
Trre9g03698 439 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 PRINTS P450 superfamily signature 289 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 PRINTS P450 superfamily signature 236 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 Coils Coil 259 279 - -
Trre9g03698 439 CDD CYP71-like 1 426 - -
Trre9g03698 439 Pfam Cytochrome P450 2 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 SUPERFAMILY Cytochrome P450 2 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03698 439 FunFam Cytochrome P450 83B1 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03698 Trre-Chr9 45335632 45338379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03698 1 436 Cytochrome P450 AT3G26310 38.964 6.90e-108 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03698 - - psat:127113357 656.751