Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03697 ATGCTTCTCACTTTTATGCACCAAAACATTGATGATGGGAGTGAACAAAATCATAACATTGATCGAACTAACATCAAAGCTATTTTACTAGACATGATTGTGGGATCAATTGATACATCTGCTACCACAATTGAATGGGCTTTATCTGAACTTCTAAGGCATCCAAGAGTGATGAAAAAACTTCAAGATGAGATACAAAATGAAGTAGGAAATAAGAGAGTGGTTGAAGAGAAGGATTTGAAGAAGTTGGATTACTTAGATATGGTGGTTAATGAAACTTTACGGCTTCATCCTGTTTCACCTTTATTACTCCCTCGTGAATGCAGAGAGAGCATAACAATTGATGGTTATTTTATTAAGGAAAAGACACGAGTTATAGTGAATGCATTGCCAATAGGTAGGGATCCTAATATTTGGTCAGAAAATGCCGAAGAATTTTATCCAGAGAGATTTATTAATAAGAAAATGAATTACGAAGGACAAGAGTTTGAAAGTATACCATTTGGATTTGGTCGTAGGCGTTGTCCTGGGATTCAATTGGGTTTGACGACCGTTAGGTTTGTTTTAGCTCAATTGGTACATTGTTTTAATTGGAAACTTCCATATAATATTAGTCCTTCCAATTTGAACATGGAGGAGAAATTTGGACAATCTATACATAGAGCTCAACCCTTGCATGCAATACCAAGTTATCGTTTGGCAGGTGATGACAAGCTTGAATAG 723 0.3582 MLLTFMHQNIDDGSEQNHNIDRTNIKAILLDMIVGSIDTSATTIEWALSELLRHPRVMKKLQDEIQNEVGNKRVVEEKDLKKLDYLDMVVNETLRLHPVSPLLLPRECRESITIDGYFIKEKTRVIVNALPIGRDPNIWSENAEEFYPERFINKKMNYEGQEFESIPFGFGRRRCPGIQLGLTTVRFVLAQLVHCFNWKLPYNISPSNLNMEEKFGQSIHRAQPLHAIPSYRLAGDDKLE 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03697 240 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 168 177 IPR017972 GO:0005506|GO:0016705
Trre9g03697 240 Pfam Cytochrome P450 9 209 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 FunFam Predicted protein 33 227 - -
Trre9g03697 240 PANTHER CYTOCHROME P450 93A3-LIKE 6 233 - -
Trre9g03697 240 PRINTS P450 superfamily signature 35 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 PRINTS P450 superfamily signature 166 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 PRINTS P450 superfamily signature 88 99 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 PRINTS E-class P450 group I signature 175 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 PRINTS E-class P450 group I signature 165 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 PRINTS E-class P450 group I signature 24 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 PRINTS E-class P450 group I signature 44 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 PRINTS E-class P450 group I signature 129 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 PRINTS E-class P450 group I signature 87 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 Gene3D Cytochrome P450 1 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 SUPERFAMILY Cytochrome P450 5 232 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03697 240 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03697 Trre-Chr9 45332090 45332812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03697 9 229 Cytochrome P450 AT2G45570 44.796 7.93e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03697 - - psat:127113357 366.696