Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03663 ATGGCCGACGCCTTACTTGGAGTTGTGTTTCAAAATTTGACATCTCTTCTTCAAAATGAATTTTCCACCATTTCTGAAATCAAGTCAAAAGCTGAAAAACTATCAATAGCCTTAGATCTCACTAAGGCAGTTCTTCAAGATGCTGAGCAGAAACAAATAACAGACAGCTCAATGAAGATATGGCTTCAGCAACTCAAAGATGCAGTTTATGTGCTAGATGATATTCTTGATGAATGTTCCATTCAATCCGATCGGCTTAGGGGATCATTCTCTTTCAAACCAATGAACATCATGTTTCGACGTGATATTGGCAACAAGTTGAATGACATTACAAGGAGATTTGATCAAATTGCTGAAAGTAAGAACAAGTTTCTTCTACGAGAGAGTTTTACTGTTAGAGAACGCCCAACTGAAGTAGATGAATGGCGCCAAACCAGCTCCTTTGTTGGTGAACCAAAAGTGTATGGACGCGAACATGATAAAGAGAAGATTGTCAAGTTTGTTCTCGCACAAGTAAGGGATTCTGAATTCCTCTCTGTCTATCCCATTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTTGCTCAAGTGGTCTACAACGATGTTAGGGTGAGTAACAATTTTAATACAAAAATTTGGATTTATGTTTCAGAGGCTTTTTCGGTCAAGAGGATTTTGTGTTCCATTATAGAATCTATCACAACAGAAAAGTGTGATATCTTGGATTTAGATGTAATACAAAGAAAGGTGCAAGAACAGTTGCAAGGAAAAAGATACTTGTTGGTTTTGGATGATGTGTGGAGCAAAAATCAACAATTGGAATTCGGATTAAGCCAAGAGAAATGGAATAGGTTGAAATGTGTGTTGTCAAGTGGATCCAAAGGTAGTTCCATTCTAGTGTCCACTCGTGACGAGGTTGTTGCAACAATTATGGGAACATGCAAACCTCATCATTTGTCTGGTCTCTCTGATAATGAATGTTGGTTATTGTTCAAACAATATGCATTTAGATATGATAGAGAAGAGCATGCAGAGCTTGTGGAAATAGGTAAGGAGATAGTAAAGAAGTGTGGTGGATTGCCTCTTGCAGCACAGGCATTGGGGGGTTTGATGCACTCAAGGACTGGAGAAAAGGAATGGCTTGAAATTAAAGAAGATAAGCTTTGGGCTTTACCGCATGAGAATTCTATTTTTCCTGTCTTGAGTTTGAGCTACTCTCATTTAACACCGACCTTGAAGCAGTGTTTCGCATTTTGTGCCGTGTTTCCAAAAGGTATGAAAATGATAAAGGAAGAATTGATTCATATTTGGATGGCTAATGGATTTATTTCATCTAGGGAAAATTTGGAGGTTGAAGATGTCGGAAGTATGATTTGGAATGAATTATGCCAAAAATCATTCTTTCAAGACATCCAAATATCTGATTATTCAAATATCATTTTTTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAATAGCGGGGCAAGAATGTGTATGTTTGGAAAATGTAAACATGACTAAATTGTCGAAAAGCACACATCATGTTACTTTTCGCGATGTTCGCATTAAATCACTTGATTCACTTGATGAAGGTGCATTTAAAAAAATAGAGTCCTTGCGAACATTGATTCAAACAGAATACCATGGGAAAAAAGCTCCTTATTACTTTCCCACAAATCGTTCTCTTCGAGTTTTATGCACTGCCTTTTTCCCGTTATCATCACTTGGAACTTTAATTCATTTGAGGTGCTTGGAACTGTATGCTTTTGACATAAAAACCTTCCCCAACTCAATTTACAACTTAAAGAAGTTGGAAATCTTGAAATTGGCACGTTGTAATAAACTGAGTTGTCTACCGAAAAACATGAGTTGCCTACAAAATCTTAGACATATAGTCATTGAACATTTCTTTTTCATGACTCGCATGTTTCCTTACATTGGCAAATTATCCAAATTAAGAACATTAAGTCTATACATTGTTAGATCAGAGAGAGGGCATAGTTTGGCAGAGCTACGTGATCTAAACTTGGGAGGAAAACTGGAAATCTTAGGCTTAAATAATGTTGGTAGTTTATTTGAAGCTCAAGAAGCAAATTTGATTGGTAAAAAAGACCTCAATGAATTATGCTTGTCTTGGACAAGCAACGGAATGTTTACCGGCAGGACCCCTACTCTTAGTGCTGAGCAACTACTTAAAGTGCTTCAACCTCAAACAAATCTCAAGAGGTTGACAATAAACTACTATAAAGGGTTATGCTTCCCAAGTTGGATCACAATTCTTAGTAGTTTAGTTACTCTTGAACTTAGAGGTTGCCCTTGCGTGACTGCTTTGCCACTTGGTAAACTTCCATCTCTAAAAAGTCTCAAATTATTTGACATGGATAGTATGAAATACTTGGATGATGATGGATCTCCCAATGCTATGGAGGTAATGGTTTTCTCATCTCTGCGTGTACTCCTATTAGCAGGGTTACCAAACTTAGAGCGGATTTTGAAAGTGGATAGAAGGGAGATGTTTCCTTGTCTTTCCACTTTAACCATCGAATATTGTCCTAAACTTGAGTTGCCATGTCTTCCATCTGTTAAAAACCTCCATGTATATGCATGTAACAATGAGGTATTGAGGTCAATCTCTAGCTTCTATGGACTTACCGCCCTCCACCTTAGTAGAATTGAAGGAATAACATCCTTCCCAGAGGGGATATTGAAAAACCTTTCTTGTCTTCAAACTCTGGAAGTAGATCATTTTCCAAAATTGAAGGAGTTACCAAACGAATCCTTCAACCTAGCTTTGGAGCGTCTGGAAATCTCTTACTGCGATGAGCTTGAGTCATTACCAGAGAAAATTTGGGAAGGTCTGCAATCCCTTCAAACCATGAGTATTCGTTATTGTAAAGGATTGAGATGCTTGCCAGAAGGTATTCGACACCTCACTTCTCTTGAGGTTCTGATAATTGATAAATGTCCAACATTAAAGGAGCGATGCATGGAGGGAACGGGGGAAGACTGGGACAAAGTAAGACATATTCCAAAATTAATTATTCATTAG 3057 0.3781 MADALLGVVFQNLTSLLQNEFSTISEIKSKAEKLSIALDLTKAVLQDAEQKQITDSSMKIWLQQLKDAVYVLDDILDECSIQSDRLRGSFSFKPMNIMFRRDIGNKLNDITRRFDQIAESKNKFLLRESFTVRERPTEVDEWRQTSSFVGEPKVYGREHDKEKIVKFVLAQVRDSEFLSVYPIVGLGGVGKTTLAQVVYNDVRVSNNFNTKIWIYVSEAFSVKRILCSIIESITTEKCDILDLDVIQRKVQEQLQGKRYLLVLDDVWSKNQQLEFGLSQEKWNRLKCVLSSGSKGSSILVSTRDEVVATIMGTCKPHHLSGLSDNECWLLFKQYAFRYDREEHAELVEIGKEIVKKCGGLPLAAQALGGLMHSRTGEKEWLEIKEDKLWALPHENSIFPVLSLSYSHLTPTLKQCFAFCAVFPKGMKMIKEELIHIWMANGFISSRENLEVEDVGSMIWNELCQKSFFQDIQISDYSNIIFFKMHDLVHDLAQSIAGQECVCLENVNMTKLSKSTHHVTFRDVRIKSLDSLDEGAFKKIESLRTLIQTEYHGKKAPYYFPTNRSLRVLCTAFFPLSSLGTLIHLRCLELYAFDIKTFPNSIYNLKKLEILKLARCNKLSCLPKNMSCLQNLRHIVIEHFFFMTRMFPYIGKLSKLRTLSLYIVRSERGHSLAELRDLNLGGKLEILGLNNVGSLFEAQEANLIGKKDLNELCLSWTSNGMFTGRTPTLSAEQLLKVLQPQTNLKRLTINYYKGLCFPSWITILSSLVTLELRGCPCVTALPLGKLPSLKSLKLFDMDSMKYLDDDGSPNAMEVMVFSSLRVLLLAGLPNLERILKVDRREMFPCLSTLTIEYCPKLELPCLPSVKNLHVYACNNEVLRSISSFYGLTALHLSRIEGITSFPEGILKNLSCLQTLEVDHFPKLKELPNESFNLALERLEISYCDELESLPEKIWEGLQSLQTMSIRYCKGLRCLPEGIRHLTSLEVLIIDKCPTLKERCMEGTGEDWDKVRHIPKLIIH 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03663 1018 Gene3D - 6 118 - -
Trre9g03663 1018 PANTHER DISEASE RESISTANCE PROTEIN RP 41 853 IPR044974 GO:0006952
Trre9g03663 1018 Gene3D Ribonuclease Inhibitor 525 854 IPR032675 -
Trre9g03663 1018 PRINTS Disease resistance protein signature 253 267 - -
Trre9g03663 1018 PRINTS Disease resistance protein signature 602 618 - -
Trre9g03663 1018 PRINTS Disease resistance protein signature 180 195 - -
Trre9g03663 1018 PRINTS Disease resistance protein signature 357 371 - -
Trre9g03663 1018 CDD RX-CC_like 2 119 IPR038005 -
Trre9g03663 1018 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 419 IPR027417 -
Trre9g03663 1018 FunFam Probable disease resistance protein At1g63360 405 494 - -
Trre9g03663 1018 SUPERFAMILY RNI-like 816 996 - -
Trre9g03663 1018 Gene3D Ribonuclease Inhibitor 856 1001 IPR032675 -
Trre9g03663 1018 Pfam Rx N-terminal domain 6 92 IPR041118 -
Trre9g03663 1018 Coils Coil 31 51 - -
Trre9g03663 1018 Gene3D - 405 495 IPR036388 -
Trre9g03663 1018 Gene3D - 138 315 IPR027417 -
Trre9g03663 1018 Pfam NB-ARC domain 158 405 IPR002182 GO:0043531
Trre9g03663 1018 Gene3D - 321 404 IPR042197 -
Trre9g03663 1018 SUPERFAMILY L domain-like 483 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03663 Trre-Chr9 45084688 45087744 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03663 183 499 WRKY Transcription Factor Family AT5G45050 26.332 9.11e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03663 - - mtr:11405813 1301.96