Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03651 ATGAAGTGGGAAATGGAAATTCTCCCTTCTACATCATTCACACCAAACACAAACACCAATTGGTGTATGGAAGATAACAATACAACAAAATGGACACCAGAAGAGAACAAGCTATTTGAAAATGCTCTTGCAGTTCATGATAAAGATACACCGGATCGATGGCATAGAGTGGCGGAAATGATACCTGGCAAGACGGTCAGCGATGTGATGAGACAATATAAGGAATTAGAAGATGATGTTTGTAATATTGAAGCTGGATTGATTCCAGTTCCTGGTTATAATACTCCTACAACTTCACCTTTTACCTTAGATTGGGTGAATAGTTCTAGTTATGATGGATTCAAAGGAAGTGGAAAGAGATCTCCTTTAGTTAGAGCAACTGAGCATGAAAGGAAGAAAGGTGTTCCATGGACAGAAGAAGAACACAAATTGTTTCTACTAGGTCTAAAGAAGTATGGTAAAGGTGATTGGAGAAATATTTCGCGCAATTTTGTCATCACAAGAACACCAACTCAAGTAGCTAGTCATGCTCAAAAGTATTTCATAAGACAACTTTCAGGAGGCAAAGACAAGAGAAGAGCTAGTATACATGACATAACAACAGTTAATCTCTCAGAAACTACTAGAACTTGTTCTTCAGAAGACACAAATAATAGATCCACATCACCACAAAATTCCATGTTACTCTCACACCAACAGCAACAATCAAGTTCTACTAGTACAAATTTTCAATGGAGGAATAATCAACAAAATGCTATGGCTTTCAATCCAGCACATGAACAAGTTTTTATGGCTCCTCATGGTGTTAATTCCTATGAGATTAAAATGCAGGATCAAAATTTTCAAAAGGGTCTTGTTAATGAGTCTTCTTATCCTCACAACATGGTTTTCCAAATGCAACATTCATCACAACATTATTCACATGCATAA 930 0.3667 MKWEMEILPSTSFTPNTNTNWCMEDNNTTKWTPEENKLFENALAVHDKDTPDRWHRVAEMIPGKTVSDVMRQYKELEDDVCNIEAGLIPVPGYNTPTTSPFTLDWVNSSSYDGFKGSGKRSPLVRATEHERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLSETTRTCSSEDTNNRSTSPQNSMLLSHQQQQSSSTSTNFQWRNNQQNAMAFNPAHEQVFMAPHGVNSYEIKMQDQNFQKGLVNESSYPHNMVFQMQHSSQHYSHA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03651 309 Gene3D - 135 185 - -
Trre9g03651 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 185 IPR017930 -
Trre9g03651 309 MobiDBLite consensus disorder prediction 207 241 - -
Trre9g03651 309 CDD SANT 30 76 IPR001005 -
Trre9g03651 309 ProSiteProfiles Myb-like domain profile. 129 181 IPR001005 -
Trre9g03651 309 ProSiteProfiles Myb-like domain profile. 23 77 IPR001005 -
Trre9g03651 309 FunFam Transcription factor SRM1 23 90 - -
Trre9g03651 309 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 184 IPR006447 GO:0003677
Trre9g03651 309 ProSiteProfiles SANT domain profile. 137 185 IPR017884 -
Trre9g03651 309 SMART sant 133 183 IPR001005 -
Trre9g03651 309 SMART sant 27 79 IPR001005 -
Trre9g03651 309 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 24 261 IPR043363 -
Trre9g03651 309 SUPERFAMILY Homeodomain-like 131 184 IPR009057 -
Trre9g03651 309 ProSiteProfiles SANT domain profile. 29 79 IPR017884 -
Trre9g03651 309 SUPERFAMILY Homeodomain-like 29 84 IPR009057 -
Trre9g03651 309 CDD SANT 136 181 IPR001005 -
Trre9g03651 309 FunFam transcription factor MYB1R1 135 186 - -
Trre9g03651 309 Gene3D - 23 90 - -
Trre9g03651 309 Pfam Myb-like DNA-binding domain 136 181 IPR001005 -
Trre9g03651 309 Pfam Myb-like DNA-binding domain 29 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03651 Trre-Chr9 45009526 45011149 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Trre9g03651 Myb_DNA-binding 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03651 - - gmx:778034 429.483