Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03641 ATGAAGAAATCATCAAGCACCAAATTGCAATATCAAAATAGTCAAAGAAAAAAGAATGGTAATTTTCAAGATAGTAAAGAAATTGATTCCACAAAGAAGCACAATTCAGCTCTGAAAAGTTTCAAATCTGCTTTCAGAAAATTTGCTTTGATTTTCATTGGTAAAAGAAAAACAGCTTCAGAACTAATTGGAAGTGGTGACAGAAATTATACATCAAAACCAAGATTGGTGGTATCATCTTCAACTGATTTATCATCTGGAAGTACCAACAAGAATTCATCAAATTGGAAATTTTCTTATTCCTATGCATCATCTAGTACTACAAGTGAGCAGCTTGGAGTTGGAAATTTCACTTTTGATGAAATTTACAAGTCAACTGCAAAATTCTCTCCAGATAATCAGATTGGAGAAGGTGGTTTTGGAACTGTCTATAGAGGAAAGCTTAATGATGGAACTATCGTTGCCGTGAAGCGTGCAAAGAAGGAAGCACTGCAGAGTGTCCTATATGAGTTCAAGAATGAAATATACACTTTATCGAAAATCGAGCACCTGAATCTTGTGAGGTTATATGGATATTTGGAGCATGGAGATGAGAAGCTTATTGTTGTTGAGTATGTTGCTAATGGGAATCTTAGAGAACATTTAGACGGCATACGAGGCAATGGACTTGAAATCGGTGAACGTCTAGACATAGCAATCGATGTAGCTCACGCAATAACTTACCTTCATATGTACACAGATAATCCAATTATACATAGAGATATCAAAGCATCAAACATCTTAATTAGCGATAATCTAAGGGCAAAAGTGGCAGACTTTGGTTTTGCAAGGTTGTCTGAAGACCCTGGTGCAACTCATATTTCAACACAAGTTAAAGGAACGGCCGGATATATGGATCCCGAGTATTTGAGAACTTATCAGCTTACAGAAAAAAGTGATGTTTATTCCTTTGGTGTATTGCTTGTTGAAATGATGACAGGAAGACATCCAATTGAACCGAAGAAAAAAATTGACGAGAGAGTTACAATCAGATGGGCAATGAAGACGCTAAAGAAAGGAGAAGCTGTGTTTGCCATGGATCCAAGACTAAGAAGAAATCCTGCCTCAATCAAGGCAATGCAGAAGGTTTTCAAGCTAGCTTTTCAATGCCTTGCGCCTTCCATACATTCGAGGCCACCTATGAAGAATTGTGCAGAGGTTCTGTGGGCCATCCGTAAAGATTATAAAGATGAAAGCACTCCTCTTCCTACCTTACCTTCTCATCAATCTGAAAATTTTCCTCAAAGAGAAAGGAATAAGCATATGTTAGGTATTGAAGATGAAGACAGCTACAAATTTACGTCTGCACCTAATCATATTCGTTCGTGA 1368 0.3721 MKKSSSTKLQYQNSQRKKNGNFQDSKEIDSTKKHNSALKSFKSAFRKFALIFIGKRKTASELIGSGDRNYTSKPRLVVSSSTDLSSGSTNKNSSNWKFSYSYASSSTTSEQLGVGNFTFDEIYKSTAKFSPDNQIGEGGFGTVYRGKLNDGTIVAVKRAKKEALQSVLYEFKNEIYTLSKIEHLNLVRLYGYLEHGDEKLIVVEYVANGNLREHLDGIRGNGLEIGERLDIAIDVAHAITYLHMYTDNPIIHRDIKASNILISDNLRAKVADFGFARLSEDPGATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMMTGRHPIEPKKKIDERVTIRWAMKTLKKGEAVFAMDPRLRRNPASIKAMQKVFKLAFQCLAPSIHSRPPMKNCAEVLWAIRKDYKDESTPLPTLPSHQSENFPQRERNKHMLGIEDEDSYKFTSAPNHIRS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03641 455 Pfam Protein tyrosine and serine/threonine kinase 132 401 IPR001245 GO:0004672|GO:0006468
Trre9g03641 455 Gene3D Phosphorylase Kinase; domain 1 89 205 - -
Trre9g03641 455 SMART serkin_6 129 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03641 455 Gene3D Transferase(Phosphotransferase) domain 1 206 416 - -
Trre9g03641 455 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 206 414 - -
Trre9g03641 455 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 93 205 - -
Trre9g03641 455 ProSiteProfiles Protein kinase domain profile. 129 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03641 455 SUPERFAMILY Protein kinase-like (PK-like) 107 405 IPR011009 -
Trre9g03641 455 ProSitePatterns Protein kinases ATP-binding region signature. 135 161 IPR017441 GO:0005524
Trre9g03641 455 MobiDBLite consensus disorder prediction 1 19 - -
Trre9g03641 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Trre9g03641 455 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 60 422 IPR044652 GO:0004672
Trre9g03641 455 CDD STKc_IRAK 135 401 - -
Trre9g03641 455 MobiDBLite consensus disorder prediction 426 447 - -
Trre9g03641 455 MobiDBLite consensus disorder prediction 413 455 - -
Trre9g03641 455 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03641 Trre-Chr9 44939252 44942584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03641 101 394 Receptor kinase-like Gene Family AT1G79620 42.904 2.72e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Trre9g03641 PK_Tyr_Ser-Thr 2.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03641 - - gmx:100788236 651.744