Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03633 ATGGCAGAGGGAGAGAGGATGGTGGAACCAGAACAAGAACAAGAACAAGAACAGGAACAACAAGAATCAGAACCAGAAACAAAGGAAACATCAACAACAACAACAATGTTGAAACACAATCAGACAATGCAGTTATTATCAGAAAAACTAACAAATGGAAACCTTAACTCAAAGATTGAAGCTGCAAGAGAAATCAGAAGAATGATTCGAAAATCATCAAAAACACGCTCTAAATTAGCTGATACTGGTGTCATTCAACCTCTTATCTTCATGCTTTCTTCTTCTAACTTTGATGCTCGTCATTCCTCTCTTCTTGCTCTCCTCAATCTTGCTGTTCGTAATGAAAGAAACAAGGTCCAAATAGTGACAGCTGGTGCAGTGCCTCCTCTGGTGGAGCTTCTCAAGATACAAAGTAATGGTATACGAGAATTAGCTACAGCCGCAGTCTTGACACTCTCATCTGCTGCAACCAACCAGCCGATTATTGCTTCTTCTGGAGCTGCTCCTCTCCTTGTTCAGATTCTGAAATCTGGAAGTGTTCAAGGCAAAGTTGATGCTGTTACAACCCTCCATAATCTCTCCTCTGGCATTGAGAACTCCATTGAACTTCTTGATGCTAGTGCTGTTTCTCCTCTTATCAACCTCCTTAAAGACTGTAAGAAGTATTCAAAGTTTGCAGAAAAAGCTACATCACTACTCGAAATCCTTTCCAACTCTGAAGAGGGACGCATCGCAATCTCGCTAGCAGACGGTGGAATTTTGACTCTAGTAGAGACAGTTGAAGACGGATCACTTGTCAGCACAGAGCATGCTGTTGGAGCATTGTTATCATTATGTCTAAGCTGCCGGGATAAATATCGGGAACTAATTCTTAAAGAAGGAGCAATTCCAGGTCTGTTACGGCTAACAGTAGAGGGCACAACCGAAGCTCAAGATAAAGCTCGCACGCTTCTGGATTTGCTCAGAGATTCTCCTCAAGAAAAAAAACTAGACTCCTCAGTTTTGGAAAAAATTGTTTTCGACATCGCTGAACGGCTAGATAGAGTAGATAAAACTGCTGAAACTTCGAAATGA 1074 0.4153 MAEGERMVEPEQEQEQEQEQQESEPETKETSTTTTMLKHNQTMQLLSEKLTNGNLNSKIEAAREIRRMIRKSSKTRSKLADTGVIQPLIFMLSSSNFDARHSSLLALLNLAVRNERNKVQIVTAGAVPPLVELLKIQSNGIRELATAAVLTLSSAATNQPIIASSGAAPLLVQILKSGSVQGKVDAVTTLHNLSSGIENSIELLDASAVSPLINLLKDCKKYSKFAEKATSLLEILSNSEEGRIAISLADGGILTLVETVEDGSLVSTEHAVGALLSLCLSCRDKYRELILKEGAIPGLLRLTVEGTTEAQDKARTLLDLLRDSPQEKKLDSSVLEKIVFDIAERLDRVDKTAETSK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03633 357 PANTHER U BOX DOMAIN-CONTAINING 31 324 - -
Trre9g03633 357 Pfam Armadillo/beta-catenin-like repeat 114 152 IPR000225 GO:0005515
Trre9g03633 357 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 125 167 IPR000225 GO:0005515
Trre9g03633 357 SMART arm_5 155 195 IPR000225 GO:0005515
Trre9g03633 357 SMART arm_5 72 112 IPR000225 GO:0005515
Trre9g03633 357 SMART arm_5 239 280 IPR000225 GO:0005515
Trre9g03633 357 SMART arm_5 113 154 IPR000225 GO:0005515
Trre9g03633 357 SMART arm_5 196 238 IPR000225 GO:0005515
Trre9g03633 357 SUPERFAMILY ARM repeat 40 327 IPR016024 -
Trre9g03633 357 Gene3D - 40 164 IPR011989 -
Trre9g03633 357 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 83 125 IPR000225 GO:0005515
Trre9g03633 357 FunFam U-box domain-containing protein 4 18 357 - -
Trre9g03633 357 Gene3D - 165 345 IPR011989 -
Trre9g03633 357 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 207 251 IPR000225 GO:0005515
Trre9g03633 357 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03633 Trre-Chr9 44874785 44879449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03633 46 323 U-box Gene Family AT3G54790 38.710 2.84e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03633 K08332 - gmx:100785760 488.804